Top Promoters Bound by aaeR

On this page you can access the list of promoter regions bound by aaeR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
yaiV 1.000 1
aaeB-aaeA-aaeX 0.939 2
aaeR 0.939 2
intA 0.881 4
nupG 0.877 5
rimO 0.875 6
bssR 0.875 6
alaA-yfbR,alaA 0.833 8
apaH-apaG-rsmA 0.819 9
yhdJ 0.761 10
tfaQ-stfQ-nohQ 0.760 11
ydfO-ynfO 0.760 11
hlyE 0.754 13
umuD-umuC 0.754 13
hemY-hemX 0.753 15
yhfA 0.744 16
crp,crp-yhfK 0.744 16
yqeF 0.633 18
yqeG 0.633 18
pdxY-tyrS-pdxH,tyrS-pdxH 0.599 20
mliC 0.599 20
csgG-csgF-csgE-csgD,csgF-csgE-csgD 0.597 22
mutM-rpmG-rpmB,rpmG-rpmB 0.595 23
yddM 0.585 24
hpf-ptsN-yhbJ-npr 0.570 25
yoaH 0.528 26
pabB-nudL 0.528 26
dusA-pspG,dusA 0.513 28
znuC,znuC-znuB 0.503 29
yegX 0.496 30
tpr-tyrV 0.491 31
tpr-tyrV-tyrT 0.491 31
ibsD 0.487 33
appY 0.475 34
ybcY 0.471 35
ftsP-plsC,plsC 0.468 36
bluF 0.468 37
ycgZ-ymgA-ariR-ymgC,ycgZ 0.468 37
yhcG 0.464 39
yagI 0.453 40
wzxC-wcaJ-cpsG-cpsB-wcaI-wcaH-wcaG-gmd-wcaF-wcaE-wcaD-wcaC 0.450 41
yneG-glsB-sad,sad 0.448 42
yneJ 0.448 42
rpoH-ftsX-ftsE 0.447 44
actP-yjcH-acs,acs 0.438 45
nrfA-nrfB-nrfC-nrfD,nrfA-nrfB-nrfC-nrfD-nrfE-nrfF-nrfG 0.438 45
msbA-lpxK-ycaQ-ycaR,msbA-lpxK 0.431 47
rpsI-rplM-zapE,zapE 0.431 48
yhcB,yhcB-degQ 0.431 48
yqeL 0.428 50
waaH 0.428 51
murI,murI-rrsB-gltT 0.425 52
yhhZ-insA-6-insB-6-insAB6 0.421 53
nc9 0.420 54
speE,speD-speE 0.420 55
cyoE-cyoD-cyoC,cyoD-cyoC 0.417 56
gadX-gadA 0.413 57
yjhG-yjhH-yjhI 0.406 58
aaaD 0.396 59
tfaD 0.396 59
yifB 0.395 61
ilvL-ilvM-ilvE-ilvD-ilvA-ilvG-ilvX,ilvL,ilvL-ilvM-ilvE-ilvG-ilvX 0.395 61
osmE 0.393 63
nadE,nadE-cho 0.393 63
yjeM,yjeM-yjeN-yjeO 0.390 65
ytiB 0.389 66
yoaI 0.386 67
yeaL 0.386 67
yiaA 0.382 69
yiaB 0.382 69
ygeG 0.381 71
yphG 0.380 72
yphH 0.380 72
rcsA 0.379 74
rfbD-rfbB-wcaN,wcaN 0.378 75
rseC-rseB 0.377 76
yaeF 0.376 77
ybjL-rybB,ybjL 0.370 78
ybjM 0.370 78
yffL 0.368 80
gspB-gspA 0.367 81
gspC-gspD-gspE-gspF-gspG-gspH-gspI-gspJ-gspK-gspL-gspM-gspO 0.367 81
yfjH 0.366 84
alpA 0.366 84
yfjI 0.366 84
yfeT 0.365 86
murQ-murP-yfeW,murQ-murP 0.365 86
dapD-glnD,glnD 0.360 88
yafN-yafO-yafP 0.359 89
yjeJ 0.356 90
gpp 0.345 91
lsrR,lsrK-lsrR 0.344 92
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG-tam 0.344 92
yccT 0.341 94
yccU 0.341 94
yedQ 0.340 96
yodC 0.340 96
gapC 0.340 98
cybB,cybB-ydcA-sokB 0.340 98
yqiA-cpdA-yqiB-nudF,cpdA-yqiB-nudF,parE-yqiA-cpdA-yqiB-nudF 0.335 100
tolC,tolC-ygiB-ygiC,tolC-ygiA-ygiB-ygiC,tolC-ygiA-ygiB 0.335 100
yebV 0.335 102
yebW 0.335 102
pck 0.333 104
ybeF 0.330 105
ybdF,nfsB-ybdF 0.329 106
ybdJ 0.329 106
dsbG 0.328 108
ahpC,ahpC-ahpF 0.328 108
umpH-nagC,nagC 0.328 110
atpC-atpD-atpG-atpA-atpH-atpF-atpE-atpB-atpI,atpA-atpH-atpF-atpE-atpB-atpI,atpH-atpF-atpE-atpB-atpI 0.327 111
potF-potG-potH,potF-potG,potF-potG-potH-potI 0.326 112
mepM-znuA,znuA 0.324 113
yedD 0.323 114
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB 0.314 115
rhaT 0.313 116
sodA-kdgT,sodA 0.313 116
yedE-yedF,yedE-yedF-yedK-yedL 0.313 118
sodB 0.313 119
hchA 0.311 120
ansP 0.311 121
yncG 0.311 121
ydhQ 0.310 123
valV-valW 0.310 123
bisC 0.307 125
yiaD 0.307 125
proP,proP-pmrR 0.306 127
yddB-yddA,yddA 0.303 128
pagP 0.301 129
ldtD-ycbK-ycbL,ldtD 0.301 130
yihA 0.300 132
csrC 0.300 132
yihI,yihI-hemN 0.300 132
kdgR 0.298 134
yebQ 0.298 134
narV-narW-narY-narZ 0.291 136
torR 0.287 137
torC-torA-torD 0.287 137
lfhA 0.286 139
lafU 0.286 139
rpmH-rnpA-yidD,rpmH-rnpA,rpmH-rnpA-yidC-mnmE-yidD,rpmH,rpmH-rnpA-yidC-yidD 0.286 141
csgB-csgA-csgC 0.285 142
truC-yqcC-csrB 0.283 143
queF,queF-ygdH 0.283 143
cysB 0.283 145
aqpZ 0.280 146
ybjD 0.280 146
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB 0.279 148
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL 0.279 148
gnsB 0.277 150
nadC 0.273 151
ampD-ampE 0.273 151
hslJ 0.273 153
yghF 0.272 154
yghG 0.272 154
caiE-caiD-caiC-caiB-caiA-caiT 0.270 156
ykgP 0.269 157
eaeH-insE-1-insF-1-insEF1 0.269 157
ycjD 0.267 159
lacI 0.265 160
ynbA-ynbB-ynbC-ynbD 0.265 161
nudJ-rluE 0.265 162
icd 0.265 162
tsaE-amiB,tsaE-amiB-mutL,tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC 0.264 164
ryjA 0.264 165
ghxP-yjcE,ghxP 0.264 165
yffQ-yffR 0.264 167
insH-11 0.263 168
yraN-diaA-yraP,yraN 0.262 169
ybfK 0.262 170
lgoT 0.258 171
mdtH 0.256 172
yceH 0.256 172
rihB 0.255 174
yeiL 0.255 174
ygfK-ssnA 0.254 176
rob 0.254 177
creA-creB-creC,creA-creB,creA-creB-creC-creD 0.254 177
yhgE 0.248 179
yncC 0.247 180
pflB 0.244 181
mnmE 0.243 182
ycaL 0.243 183
yeaV-yeaW 0.240 184
bglX 0.239 185
dld 0.239 185
yfbM 0.238 187
yehR 0.238 188
yciE 0.238 189
ynbG 0.236 190
ydbA 0.236 190
ysaE 0.233 193
hokA 0.233 193
insJ 0.233 193
insJK 0.233 193
yncI 0.232 196
yaiO 0.232 198
insC-1-insD-1 0.232 198
insC-1-insD-1-insCD1 0.232 198
infB-nusA 0.230 200
pabC-yceG-tmk,pabC-yceG-tmk-holB-ycfH 0.230 201
yahL 0.229 202
degP 0.228 203
mukF-mukE 0.228 204
gadW 0.228 205
gadY 0.228 205
ydiF-ydiO 0.227 207
yfaL 0.227 208
trpS-gph-rpe-dam 0.226 209
feaB 0.226 210
galP 0.223 211
ssnA 0.222 212
yfbK 0.222 213
yfbL 0.222 213
garR 0.221 215
ybfP 0.220 216
narL-narX 0.220 217
narK 0.220 217
ada-apbE-ompC,ompC 0.219 219
micF 0.219 219
ygeA 0.219 221
cvrA-ldcA,ldcA 0.218 222
insH-10 0.216 223
yhcF 0.216 223
hha-tomB 0.216 225
yggE-argO-mscS,mscS 0.214 226
cadA 0.213 227
yahC 0.212 228
yahD-yahE-yahF-yahG 0.212 228
cysT-glyW-pgsA-uvrC-uvrY,uvrC-uvrY 0.211 231
yecU 0.211 231
yecF 0.211 231
yhcA-yhcD 0.210 233
ybcV 0.210 234
ybcW 0.210 234
cca 0.210 236
yigF-yigG 0.210 237
yphB-yphC 0.209 238
ypjI 0.209 239
yfjX-yfjY-yfjZ-ypjF-ypjJ 0.209 239
wbbH-glf 0.209 241
kduI 0.209 242
ybfH 0.208 243
yohH 0.208 244
yohP 0.208 244
yqaE,ygaU-yqaE 0.207 246
yeaK-yeaL,yeaK 0.207 247
uidR 0.207 248
folX-yfcH 0.206 249
yafT 0.205 250
wzxB-rfbC-rfbA 0.205 251
yfjP-yfjQ 0.205 252
yihL-yihM-yihN,yihL-yihM 0.204 253
ycgR 0.203 254
ymgE 0.203 254
glnB 0.203 256
ybdO 0.202 257
yeiQ 0.202 258
htpX 0.200 259
matA 0.200 260