Top Promoters Bound by cadC

On this page you can access the list of promoter regions bound by cadC. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
cadA-cadB 1.000 1
proS-tsaA-rcsF,tsaA-rcsF 0.803 2
pfkB-ydiZ-yniA,pfkB 0.785 3
ydiY 0.721 4
rhsE-ydcD 0.587 5
ygeV 0.374 6
intA 0.345 7
ygeW 0.335 8
cadC 0.311 9
ynfK 0.307 10
osmB 0.291 11
ycfP 0.284 12
malZ 0.281 13
yoaF 0.271 14
yeaP-yoaJ-yoaK,yeaP 0.271 14
cysM-cysA-cysW-cysU-cysP,cysA-cysW-cysU-cysP 0.255 16
uhpC-uhpB-uhpA-ilvN-ilvB-ivbL,uhpA-ilvN-ilvB-ivbL,ivbL,ilvN-ilvB-ivbL 0.246 17
istR 0.246 18
tisB 0.246 18
emrD 0.246 20
yneO 0.238 21
yaaA 0.221 22
yjiE 0.214 23
insH-7 0.207 24
mcrA 0.203 25
gadX,gadW-gadX 0.202 26
rnlA,rnlA-rnlB 0.200 27
yfjL,yfjK-yfjL 0.200 28
raiA,raiA-pheL 0.192 29
hofQ 0.188 30
eamB 0.179 31
yfiE 0.179 32
ymgD-ymgG 0.178 33
ymgJ 0.178 33
ymgH 0.178 35
ymgI 0.178 36
dkgA 0.178 37
pinQ 0.176 38
ynaE 0.176 39
pinR 0.176 40
yiaY 0.176 41
aspT 0.171 42
glnQ-glnP-glnH,glnH 0.165 43
betA-betB-betI 0.164 44
rclC-rclB-rclA 0.163 45
ykgD 0.163 46
aroM 0.162 47
nfrA-nfrB,nfrB 0.162 48
trpT 0.161 49
kduI 0.159 50
yeaK-yeaL,yeaK 0.159 51
ompT 0.159 52
gldA-fsaB-frwA 0.158 53
frwC-frwB 0.158 53
yfbU-yfbV,yfbV 0.158 55
ackA,ackA-pta 0.158 55
ileY 0.158 57
yadC 0.153 58
ydjG-ydjH-ydjI-ydjJ-ydjK-ydjL 0.151 59
lit 0.151 60
ymfD-ymfE 0.151 61
yecT 0.150 62
yecV 0.150 63
atpG-atpA-atpH-atpF,atpA-atpH-atpF 0.148 64
dmsC 0.144 65
yjhQ-yjhX,yjhP-yjhQ-yjhX 0.143 66
ynfC 0.143 67
ynfD 0.143 67
mtlA,mtlA-mtlD-mtlR 0.142 69
yibH-yibI 0.142 70
yhdJ 0.140 71
spf 0.139 72
pitB 0.138 73
rraA-menA,menA 0.137 74
ryfA 0.135 75
dmsA-dmsB-dmsC,dmsA-dmsB 0.135 76
bssS 0.135 77
ybfH 0.131 78
yjbS 0.129 79
aphA-yjbQ-yjbR,aphA 0.129 79
ybfD 0.129 81
yaiW 0.128 82
ldtE 0.127 83
pbpG 0.126 84
ykiE 0.126 85
yaiS 0.126 86
tauA-tauB-tauC-tauD,tauA-tauB-tauC 0.126 87
sdiA 0.125 88
yagG-yagH 0.124 89
ydcC 0.124 90
yobB-exoX 0.123 91
ompL 0.122 92
metF 0.121 93
yhdU 0.120 94
fabF 0.120 95
kduD 0.119 96
glnU-leuW-metT-asnB,asnB,glnW-glnU-leuW-metT-asnB 0.119 97
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.118 98
cirA 0.117 99
kdgR 0.116 100
yebQ 0.116 101
yghX 0.115 103
yqhI 0.115 103
gpr 0.115 103
naRNA5 0.114 106
naRNA4 0.114 106
naRNA3 0.114 106
naRNA1 0.114 108
naRNA2 0.114 109
lsrK 0.111 110
ydeM-ydeN,ydeN 0.111 111
ihfA-pheT-pheS-pheM,pheM 0.110 112
sokC 0.109 113
ldtC 0.109 114
insH-2-nmpC,insH-2 0.105 115
ymiB 0.105 116
gmr,gmr-yciZ 0.105 117
fur 0.104 118
fur-uof 0.104 119
ulaA-ulaB-ulaC-ulaD-ulaE,ulaA-ulaB-ulaC-ulaD-ulaE-ulaF 0.103 120
ulaG 0.103 121
ybfL 0.103 122
tolB-pal-ybgF-lysT-valT-lysW-valZ,tolB-pal-ybgF-lysT,tolB-pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ-lysQ,tolB-pal-ybgF-lysT-valT-lysW-valZ-lysY,tolB-pal-ybgF,tolB-pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ,tolB-pal-ybgF-lysT-valT 0.103 123
mtr-deaD,deaD 0.102 124
deaD-yrbN,yrbN 0.102 125
gpp 0.102 126
yhhI 0.102 127
araD-araA-araB,araA-araB 0.101 128
araC,araC-yabI 0.101 129
ypjA 0.101 130