Top Promoters Bound by cpxR

On this page you can access the list of promoter regions bound by cpxR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
yagU 1.000 1
paoD-paoC-paoB-paoA 1.000 2
cpxP 0.458 3
cpxA-cpxR 0.458 4
ytfL 0.403 5
G0-10706 0.403 5
yafZ 0.399 7
tusE-yccA,yccA 0.391 8
serT 0.391 9
xylB 0.388 10
cof 0.280 11
yoaB,yoaB-yoaC 0.270 12
yeaY-tsaB-yoaA,yoaA 0.270 13
yidB-gyrB,gyrB 0.269 14
ispF-ispD 0.266 15
ftsB,truD-ispF-ispD-ftsB,umpG-truD-ispF-ispD-ftsB,pcm-umpG-truD-ispF-ispD-ftsB 0.266 15
ybfQ 0.257 17
ybfL 0.255 18
metQ 0.248 19
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB 0.241 20
ygeI 0.240 21
tufA 0.224 22
yliE-yliF 0.222 23
ykgJ 0.221 24
yqgG 0.206 25
metK 0.206 25
yqgD 0.206 27
yfgH-yfgI 0.205 28
gfcD-gfcC 0.199 29
atoD-atoA-atoE-atoB 0.194 30
rlmM-ygdD,ygdD 0.193 31
argQ-argZ-argY-argV-serV 0.191 32
yehS 0.186 33
yciT 0.184 34
ymiD 0.184 34
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE 0.183 36
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX 0.183 37
yjeN-yjeO 0.183 38
yceI-yceJ 0.181 39
yjtD 0.181 40
dsbG 0.179 41
ahpC,ahpC-ahpF 0.179 42
ecpE-ecpD-ecpC-ecpB 0.179 43
lplA-ytjB 0.175 44
serB-radA-nadR,serB-radA,serB 0.175 45
pqiA-pqiB-pqiC 0.166 46
nagC-nagA,nagA 0.165 47
slyB 0.164 48
pdxH-mliC-anmK,anmK,mliC-anmK 0.164 49
cspI 0.161 50
ynfR 0.161 51
ynfQ 0.161 51
fepB 0.160 53
entC-entE-entB-entA,entC-entE-entB-entA-entH,entC-entE-entB 0.160 53
ycaM 0.159 55
gapC 0.158 56
cybB,cybB-ydcA-sokB 0.158 56
yihA 0.156 58
csrC 0.156 58
sapB-sapA-ymjA,sapA-ymjA,ymjA 0.156 60
dgcZ 0.153 61
nirC 0.152 62
asr 0.151 63
fur 0.149 64
fur-uof 0.149 64
acpT 0.148 66
yjiA-yjiX-yjiY,yjiX-yjiY,yjiY 0.146 67
tsr 0.146 68
rluC 0.146 69
rplY 0.145 70
rplX-rplN-rpsQ-rpmC 0.145 71
ymgD-ymgG 0.145 72
ymgJ 0.145 72
ymgI 0.145 74
tdcF-tdcE-tdcD-tdcC-tdcB-tdcA-tdcG 0.143 75
tdcR 0.143 76
insK 0.143 77
ydgC 0.141 78
rstA-rstB,rstA-rstB-tus 0.141 79
psuG-psuK 0.139 80
dnaX-ybaB-recR,dnaX 0.139 81
mqo 0.138 82
lpxT 0.137 83
yifK-argX-hisR-leuT-proM,yifK 0.136 84
fadE 0.134 85
gmhA,gmhA-yafJ 0.134 85
ygeA-araE,araE 0.133 87
fic-yhfG-ppiA,yhfG-ppiA,ppiA 0.132 88
tsgA 0.132 89
otsA 0.128 90
yriA 0.128 92
yriB 0.128 92
dtpB 0.128 92
yjbJ 0.125 94
tnaC,tnaC-tnaA 0.124 95
rclC-rclB-rclA 0.124 96
ykgD 0.124 97
yqjA-mzrA,yqjA-mzrA-yqjC-yqjD 0.124 98
yqiM 0.124 99
recJ-dsbC,prfB-recJ-dsbC,dsbC 0.122 100
hisS-ispG-yfgA,yfgA 0.122 101
yjjX 0.121 102
pliG 0.121 103
ycgL 0.121 103
ycgM,ycgM-ycgN 0.121 105
rsmB 0.119 106
adhE 0.118 107
ychT 0.118 108
ychE 0.118 108
oppA5p 0.118 110
ydeA 0.118 111
rprA 0.118 112
ydiL 0.118 113
ydcS-ydcT-ydcU-ydcV-patD 0.118 114
ydeR-ydeS-ydeT 0.117 115
yfeN 0.116 116
xapB-xapA 0.116 117
napC-napB-napH-napG-napA-napD-napF,ccmH-dsbE-ccmF-ccmE-ccmD-ccmC-ccmB-ccmA-napC-napB-napH-napG-napA-napD-napF,napA-napD-napF 0.116 119
yojO 0.116 119
eco 0.116 119
poxB,ybjT-ltaE-poxB 0.115 121
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff 0.115 122
rpsB-tsf,rpsB-tsf-pyrH-frr 0.115 123
dapD-glnD-map,glnD-map,map 0.115 124
yqeC 0.115 125
mocA 0.115 126
ada-apbE-ompC,ompC 0.113 128
micF 0.113 128
rcsD-rcsB 0.113 128
yibY 0.112 130
yibX 0.112 131
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.111 132
araD-araA-araB,araA-araB 0.110 133
araC,araC-yabI 0.110 133
ydhR 0.110 135
ydhS 0.110 136
mntH 0.107 137
nupC,nupC-insL-3 0.107 137
yaiS 0.107 139
mglC-mglA-mglB,mglA-mglB 0.106 140
yaiP 0.106 141
yeaI 0.105 142
rpoS 0.105 143
ycgE 0.102 144