Top Promoters Bound by cpxR

On this page you can access the list of promoter regions bound by cpxR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
paoD-paoC-paoB-paoA 1.000 1
yagU 1.000 1
cpxA-cpxR 0.458 3
cpxP 0.458 3
ytfL 0.403 5
G0-10706 0.403 5
yafZ 0.399 7
tusE-yccA,yccA 0.391 8
serT 0.391 8
xylB 0.388 10
cof 0.280 11
yeaY-tsaB-yoaA,yoaA 0.270 12
yoaB,yoaB-yoaC 0.270 12
yidB-gyrB,gyrB 0.269 14
ispF-ispD 0.266 15
ftsB,truD-ispF-ispD-ftsB,umpG-truD-ispF-ispD-ftsB,pcm-umpG-truD-ispF-ispD-ftsB 0.266 15
ybfQ 0.257 17
ybfL 0.255 18
metQ 0.248 19
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB 0.241 20
ygeI 0.240 21
tufA 0.224 22
yliE-yliF 0.222 23
ykgJ 0.221 24
yqgG 0.206 26
yqgD 0.206 26
metK 0.206 26
yfgH-yfgI 0.205 28