Top Promoters Bound by deoR

On this page you can access the list of promoter regions bound by deoR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs)	Scores	Ranks

nupG	1.000	1
tsx	0.495	2
agp	0.492	3
yibH-yibI	0.466	4
mtlA,mtlA-mtlD-mtlR	0.465	5
gnsA	0.463	6
insH21	0.443	7
yjjW-yjjI,yjjI	0.393	8
deoC-deoA,deoC-deoA-deoB,deoC-deoA-deoB-deoD	0.393	8
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT	0.386	10
vsr-dcm-yedJ,dcm-yedJ,yedJ	0.372	11
rseX	0.372	12
yedJ-yedR	0.372	13
wecA-wzzE-wecB-wecC-rffG-rffH-wecD-wecE-wzxE-wzyE-wecG-wecF,wecA-wzzE,wecA-wzzE-wecB	0.371	14
ynfK	0.359	15
mntH	0.351	16
nupC,nupC-insL-3	0.351	16
galP	0.337	18
ybjL-rybB,ybjL	0.336	19
ybjM	0.336	20
insG	0.334	21
ygiS-ygiT-mqsR,ygiT-mqsR	0.322	22
ygiT	0.322	23
mglC-mglA-mglB,mglA-mglB	0.321	24
yqeC	0.321	25
mocA	0.321	26
aroP	0.313	27
pdhR,pdhR-aceE-aceF-lpd	0.313	27
ygfK-ssnA	0.308	29
galS	0.290	30
ydcL-insQ,ydcL	0.287	31
menE-menC-menB-menH-menD-menF,menH-menD-menF,menD-menF	0.280	32
pheL-pheA	0.279	33
raiA,raiA-pheL	0.279	34
ydiM	0.277	35
ybiV	0.268	36
cysB	0.267	37
yeeD-yeeE	0.265	38
mreB-csrD,csrD	0.265	39
acuI	0.265	40
yghR-yghS	0.265	41
yghT	0.265	42
yedN	0.263	43
elfD-elfC-elfG-ycbU-ycbV-ycbF	0.258	44
insH-9	0.256	45
tnaC,tnaC-tnaA	0.253	46
glpA-glpB,glpA-glpB-glpC	0.249	47
inaA-glpQ-glpT,glpQ-glpT	0.249	48
yjhB-yjhC	0.249	49
mraZ-rsmH-ftsL,mraZ-rsmH-ftsL-ftsI-murE-murF-mraY-murD-ftsW-murG-murC-ddlB-ftsQ-ftsA-ftsZ-lpxC	0.248	50
ygcW	0.246	51
yqcE-ygcE	0.246	51
maa	0.244	53
etk-etp-gfcE	0.244	54
yggT-yggU-rdgB-yggW	0.243	55
sdsR,pphA-sdsR	0.243	56
ygbI	0.239	57
ygbJ-ygbK,ygbJ-ygbK-ygbL-ygbM	0.239	58
ysaB	0.238	59
wecH	0.238	60
preT-preA	0.236	61
fabA	0.233	62
yeeJ	0.232	63
asnT	0.232	64
rng	0.228	65
leuZ-cysT-glyW-pgsA,pgsA	0.227	66
clpP-clpX	0.226	67
rcsD-rcsB	0.226	68
micF	0.226	69
serC-aroA-ycaL,serC,serC-aroA	0.223	70
ahr	0.223	71
leuX	0.223	72
intB	0.223	73
ygiM,ygiM-cca	0.222	74
fdhE-fdoI-fdoH-fdoG,fdoH-fdoG	0.222	75
fdhD	0.222	75
nc7	0.220	77
fabI,yciW-fabI	0.220	78
umpH-nagC-nagA-nagB,nagC-nagA-nagB	0.219	79
nagE	0.219	79
gldA-fsaB-frwA	0.215	81
frwC-frwB	0.215	81
yjcC	0.212	83
yjcB	0.212	84
aegA	0.211	85
narQ	0.211	85
dcuR	0.209	87
stpA	0.208	88
ilvC	0.207	89
ilvY	0.207	90
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB	0.205	91
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL	0.205	91
yidP	0.202	93
glvG-glvB-glvC	0.202	94
prc-proQ-msrC,msrC	0.202	95
yebS-yebT	0.202	95
ubiE-ubiJ-ubiB-tatA-esrE,ubiE-ubiJ-ubiB-tatA-tatB-esrE,ubiE-ubiJ-ubiB	0.201	97
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA	0.200	98
cysH	0.200	99
hcr	0.200	100
cydA-cydB-ybgE-cydX,cydA-cydB,cydA-cydB-ybgE-ybgC-cydX,cydA,cydA-cydB-cydX	0.199	101
sbcB	0.198	102
dacD,sbmC-dacD	0.198	103
lldP-lldR-lldD	0.198	104
thrU-tyrU-glyT-thrT-tufB-secE-nusG-rplK,thrU-tyrU-glyT-thrT-tufB-secE-nusG,thrU-tyrU-glyT-thrT-tufB	0.195	105
coaA	0.195	106
wzzB	0.194	107
yciN	0.194	108
topA	0.194	108
yebW	0.193	110
yebV	0.193	111
pabC-yceG-tmk,pabC-yceG-tmk-holB-ycfH	0.191	112
cusC-cusF,cusC-cusF-cusB-cusA	0.189	113
cusS-cusR	0.189	114
nc9	0.187	115
dapB	0.187	116
ypdK	0.187	117
yqfI	0.185	118
gcvH-gcvT,gcvP-gcvH-gcvT	0.185	119
yfeX	0.184	120
potF-potG-potH,potF-potG,potF-potG-potH-potI	0.184	121
yjbB	0.181	122
fucO-fucA	0.180	123
fucP-fucI-fucK-fucU-fucR	0.180	124
yjiN-mdtM	0.179	125
yjiP	0.179	125
accB-accC,accB-accC-yhdT	0.178	127
yqcA	0.178	128
opgG-opgH	0.177	129
opgC	0.177	130
thiF-thiE-thiC-rsd-thiS,rsd	0.177	131
nudC-hemE-nfi,nudC-hemE-nfi-yjaG-hupA	0.177	132
der-bamB	0.177	133
ubiC-ubiA	0.176	134
yegH	0.175	135
yjiA-yjiX-yjiY,yjiX-yjiY,yjiY	0.175	136
tsr	0.175	137
mscM-psd,psd	0.175	138
rprA	0.175	139
ydiL	0.175	139
hsdS-hsdM-hsdR,hsdR	0.174	141
mrr	0.174	142
hybG-hybF-hybE-hybD-hybC-hybB-hybA-hybO,hybB-hybA-hybO,hybA-hybO	0.171	143
hybB-hybA-hybO-yghW,yghW	0.171	144
yaiC	0.171	145
psiF	0.171	146
nlpE	0.170	147
serA,serA-ibsC	0.167	148
insF-2-insE-2-insEF2	0.165	149
insF-4-insE-4-insEF4	0.165	149
insE-1-insF-1	0.165	154
exoD	0.165	154
renD	0.165	154
insE-3-insF-3-emrE	0.165	154
insE-3-insF-3-insEF3	0.165	154
ymdE-ycdU	0.165	154
insE-5-insF-5-insEF5	0.165	154
alpA	0.164	158
dapD,yaeI-dapD,yaeH-yaeI-dapD	0.163	159
apt,apt-dnaX-ybaB	0.163	160
yqiG	0.162	161
trpS	0.162	162
yecJ-azuC,azuC	0.160	163
yecR	0.160	164
yecJ	0.160	165
yihQ	0.160	166
ybbA,ybbA-ybbP	0.159	167
ybbN-ybbO	0.159	168
yibG	0.155	169
rob	0.154	170
creA-creB-creC,creA-creB,creA-creB-creC-creD	0.154	170
putA	0.153	172
putP	0.153	172
ymdG	0.153	174
ydfH	0.153	175
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB	0.152	176
gshB-yqgE-yqgF	0.152	177
aspC-ompF,ompF	0.152	178
phoU-pstB-pstA-pstC-pstS,pstB-pstA-pstC-pstS,pstA-pstC-pstS,pstS	0.151	179
sgcR-sgcE-sgcA-sgcQ-sgcC-sgcX-sgcB	0.151	180
acrR	0.151	181
acrB-acrA,acrA	0.151	182
rrsH-ileV-alaV-rrlH-rrfH,rrsH-ileV-alaV,rrsH-ileV	0.150	183
rrsE,rrsE-gltV,rrsE-gltV-rrlE-rrfE	0.150	183
purD-purH	0.150	185
ygeF	0.150	186
yqeK	0.150	187
trxA-rhoL-rho,trxA-rhoL-rho-wecA,trxA	0.149	188
gpp-rhlB,rhlB	0.149	189
ygfS-ygfT	0.149	190
ymgD-ymgG	0.149	191
ymgJ	0.149	191
amyA	0.148	193
nagC-nagA,nagA	0.148	194
ynfU	0.147	195
rzpQ-rrrQ-ydfR-essQ	0.147	196
yqhJ	0.147	197
yeaC-msrB,msrB	0.146	198
gapA,gapA-yeaD	0.146	198
gnd	0.145	200
yihL-yihM-yihN,yihL-yihM	0.145	201
hypA-hypB-hypC-hypD-hypE-fhlA,hypA-hypB-hypC-hypD-hypE	0.145	202
hycI-hycH-hycG-hycF-hycE-hycD-hycC-hycB-hycA	0.145	203
ppa	0.143	204
ytfQ-ytfT-yjfF-ytfR	0.143	205
yggX,yggX-mltC-nupG,yggX-mltC	0.143	206
ybjS	0.142	207
yeeY	0.142	208
actP-yjcH-acs,acs	0.141	209
nrfA-nrfB-nrfC-nrfD,nrfA-nrfB-nrfC-nrfD-nrfE-nrfF-nrfG	0.141	209
ydeM-ydeN,ydeN	0.141	211
ydeP	0.140	212
mepM-znuA,znuA	0.140	213
znuC,znuC-znuB	0.140	214
ompA	0.139	215
miaA-hfq-hflX,miaA-hfq-hflX-hflK-hflC	0.139	216
yjbD-lysC,lysC	0.139	217
yceI	0.139	218
glcA-glcB-glcG-glcD-glcF-glcE	0.139	219
glcC	0.139	220
lacI	0.138	221
nfo,nfo-yeiI	0.138	222
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB	0.137	223
nanS	0.136	224
efp,efp-ecnA-ecnB	0.136	225
epmB	0.136	226
mgrR	0.136	227
aceB-aceA-aceK,aceB-aceA	0.136	228
yacH	0.135	229
acnB,acnB-yacL	0.135	229
gor-agrA,gor	0.135	231
ygeW	0.135	232
aat	0.135	233
glgS	0.134	234
yqiJ-yqiK	0.134	235
ymgM	0.134	236
bioH	0.133	237
nfuA	0.133	238
rrfF-thrV-rrfD-rrlD-alaU-ileU-rrsD,alaU-ileU-rrsD,rrsD	0.133	239
yrdA	0.133	240
ybbY-glxK	0.132	241
glnG-glnL-glnA-yshB,glnG-glnL-glnA,glnL-glnA,glnA	0.132	242
typA	0.132	243
yqeB	0.131	244
minE-minD	0.131	245
fsr	0.131	246
csgA	0.131	247
yagL-yagM	0.130	248
dapD-glnD-map,glnD-map,map	0.130	250
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff	0.130	250
rpsB-tsf,rpsB-tsf-pyrH-frr	0.130	250
ligB	0.129	252
gmk-rpoZ-spoT-trmH,gmk	0.129	252
lgoD	0.129	254
yebK-pykA,yebK	0.129	255
zwf	0.129	256
lipA	0.128	257
fliY-fliZ-fliA	0.128	258
alx	0.128	259
ycgE	0.127	260
yiiX	0.126	261
metB-metL	0.126	262
yiiX-metJ,metJ	0.126	263
arpA	0.124	264
ptsH-ptsI-crr,ptsH,ptsH-ptsI	0.124	265
rne	0.123	266
yceQ	0.123	267
ycaL	0.123	268
hspQ	0.123	269
intG	0.122	270
kduD	0.122	271
lit	0.121	272
tdcF-tdcE-tdcD-tdcC-tdcB-tdcA-tdcG	0.121	273
tdcR	0.121	273
mdtG	0.121	275
ipeX	0.120	276
lpp	0.120	277
fdoH	0.120	278
rhmA-rhmT-rhmD-yfaX,rhmD-yfaX	0.119	279
allS	0.118	280
allA	0.118	280
frlA-frlB-frlD-yhfR-frlC	0.118	282
araG-araF-araH	0.117	283
ycjG	0.117	284
tpx	0.117	285
ileY	0.117	286
lipB-ybeD-dacA,dacA	0.117	287
ssnA	0.117	288
slp-dctR	0.117	289
phoE	0.117	290
proB,proB-proA,proB-proA-thrW	0.117	290
ushA	0.116	292
hofC-hofB-ppdD	0.116	293
dauA-prsA,prsA	0.116	294
gntP	0.116	295
uxuA-uxuB	0.116	295
yjiK-yjiL-yjiM-ytiA,yjiL-yjiM	0.115	297
ansB	0.115	298
greB-yhgF,greB	0.115	299
ryeA	0.115	300
malF-malE,malG-malF-malE	0.114	301
malK,malK-lamB-malM	0.114	301
ycfJ	0.114	303
mtr	0.114	304
mnmH,ylbG-mnmH	0.113	305
nc10	0.113	306
oweE	0.113	306
yhiJ	0.113	308
ybdH	0.112	309
ybdL	0.112	310
lacY-lacZ,lacA-lacY-lacZ	0.110	311
cdaR	0.110	312
allR,allR-gcl-hyi	0.110	313
ygeN-ygeO-insD-4-insC-4-insCD4	0.110	314
ptsG	0.110	315
glyT-thrT-tufB-secE-nusG,glyT-thrT-tufB	0.109	316
yijF	0.108	317
adiA	0.108	318
cadC	0.108	319
yniD	0.108	320
dhaM	0.108	321
pepB	0.107	322
ihfA-pheT-pheS-pheM-rplT-rpmI-infC-thrS,pheM-rplT-rpmI-infC-thrS,rplT-rpmI-infC-thrS,thrS,infC-thrS	0.107	323
arpB	0.107	323
rclC-rclB	0.106	325
argD	0.106	326
poxB,ybjT-ltaE-poxB	0.106	327
psuG-psuK	0.106	328
pldB-yigL	0.106	329
lnt-ybeX,ybeX	0.105	330
carB	0.105	331
rpoE,rseC-rseB-rseA-rpoE,rseA-rpoE	0.105	333
rseC-rseB-rseA-rpoE-rseD	0.105	333
nadB	0.105	333
yfaZ	0.105	335
nudI	0.105	335
yfgH-yfgI	0.105	337
glgP-glgA-glgC,glgC	0.104	338
kdgK	0.104	339
yhjH	0.104	340
folX-yfcH	0.104	341
ybcH-nfrA,nfrA	0.104	342
yhhS	0.104	343
yhhT	0.104	344
sapF-sapD-sapC-sapB-sapA,sapC-sapB-sapA,sapA	0.103	345
pgi	0.103	346
dinQ	0.102	347
agrA	0.102	348
dicA	0.102	349
sxy	0.102	350
ompA-sulA,sulA	0.102	351
yjbJ	0.102	352
yciA-yciB-yciC,yciB-yciC	0.102	353
ompW	0.102	353
degQ,degQ-degS	0.102	355
aldA	0.101	356
copA	0.101	357
glsA-ybaT	0.101	357
ygdT	0.101	359
mutH	0.101	359
yncC	0.101	361
rpiA,serA-rpiA	0.101	362
asnS	0.100	363
aroB	0.100	364
ygbF-ygbT-casE-casD-casC-casB-casA	0.100	365
yeeX	0.100	366
pqiA-pqiB-pqiC	0.100	367