Top Promoters Bound by deoR

On this page you can access the list of promoter regions bound by deoR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
nupG 1.000 1
tsx 0.495 2
agp 0.492 3
yibH-yibI 0.465 4
mtlA,mtlA-mtlD-mtlR 0.465 4
gnsA 0.463 6
insH21 0.443 7
yjjW-yjjI,yjjI 0.393 8
deoC-deoA,deoC-deoA-deoB,deoC-deoA-deoB-deoD 0.393 8
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT 0.386 10
vsr-dcm-yedJ,dcm-yedJ,yedJ 0.372 12
yedJ-yedR 0.372 12
rseX 0.372 12
wecA-wzzE-wecB-wecC-rffG-rffH-wecD-wecE-wzxE-wzyE-wecG-wecF,wecA-wzzE,wecA-wzzE-wecB 0.371 14
ynfK 0.359 15
mntH 0.351 16
nupC,nupC-insL-3 0.351 16
galP 0.337 18
ybjL-rybB,ybjL 0.336 19
ybjM 0.336 19
insG 0.334 21
ygiT 0.322 22
ygiS-ygiT-mqsR,ygiT-mqsR 0.322 22
mglC-mglA-mglB,mglA-mglB 0.321 24
yqeC 0.321 25
mocA 0.321 25
aroP 0.313 27
pdhR,pdhR-aceE-aceF-lpd 0.313 27
ygfK-ssnA 0.308 29
galS 0.290 30
ydcL-insQ,ydcL 0.287 31
menE-menC-menB-menH-menD-menF,menH-menD-menF,menD-menF 0.280 32
raiA,raiA-pheL 0.279 33
pheL-pheA 0.279 33
ydiM 0.277 35
ybiV 0.268 36
cysB 0.267 37
yeeD-yeeE 0.265 38
mreB-csrD,csrD 0.265 39
acuI 0.265 39
yghR-yghS 0.265 41
yghT 0.265 41
yedN 0.263 43
elfD-elfC-elfG-ycbU-ycbV-ycbF 0.258 44
insH-9 0.256 45
tnaC,tnaC-tnaA 0.253 46
inaA-glpQ-glpT,glpQ-glpT 0.249 47
glpA-glpB,glpA-glpB-glpC 0.249 47
yjhB-yjhC 0.249 49
mraZ-rsmH-ftsL,mraZ-rsmH-ftsL-ftsI-murE-murF-mraY-murD-ftsW-murG-murC-ddlB-ftsQ-ftsA-ftsZ-lpxC 0.248 50
ygcW 0.246 51
yqcE-ygcE 0.246 51
maa 0.244 53
etk-etp-gfcE 0.244 54
yggT-yggU-rdgB-yggW 0.243 55
sdsR,pphA-sdsR 0.243 56
ygbI 0.239 57
ygbJ-ygbK,ygbJ-ygbK-ygbL-ygbM 0.239 57
ysaB 0.238 59
wecH 0.238 59
preT-preA 0.236 61
fabA 0.233 62
asnT 0.232 63
yeeJ 0.232 63
rng 0.228 65
leuZ-cysT-glyW-pgsA,pgsA 0.227 66
clpP-clpX 0.226 67
micF 0.226 68
rcsD-rcsB 0.226 68
serC-aroA-ycaL,serC,serC-aroA 0.223 70
ahr 0.223 72
leuX 0.223 72
intB 0.223 72
ygiM,ygiM-cca 0.222 74
fdhE-fdoI-fdoH-fdoG,fdoH-fdoG 0.222 75
fdhD 0.222 75
fabI,yciW-fabI 0.220 77
nc7 0.220 77
umpH-nagC-nagA-nagB,nagC-nagA-nagB 0.219 79
nagE 0.219 79
gldA-fsaB-frwA 0.215 81
frwC-frwB 0.215 81
yjcB 0.212 83
yjcC 0.212 83
aegA 0.211 85
narQ 0.211 85
dcuR 0.209 87
stpA 0.208 88
ilvY 0.207 89
ilvC 0.207 89
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB 0.205 91
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL 0.205 91
glvG-glvB-glvC 0.202 93
yidP 0.202 93
prc-proQ-msrC,msrC 0.202 95
yebS-yebT 0.202 95
ubiE-ubiJ-ubiB-tatA-esrE,ubiE-ubiJ-ubiB-tatA-tatB-esrE,ubiE-ubiJ-ubiB 0.201 97
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.200 98
cysH 0.200 99