Top Promoters Bound by fimZ

On this page you can access the list of promoter regions bound by fimZ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
allE-allC-allD 1.000 1
fdrA-ylbF-ybcF-ylbE 1.000 1
nhaR 0.836 3
yjjX 0.818 4
ytjC 0.818 4
ysdE 0.723 6
emrD 0.723 6
yncL 0.687 9
ydcX 0.687 9
ydcY 0.687 9
rcnB 0.683 11
hemL 0.657 13
yadX 0.657 13
clcA-erpA,clcA 0.657 13
hycI-hycH-hycG-hycF-hycE-hycD-hycC-hycB-hycA 0.612 16
hypA-hypB-hypC-hypD-hypE-fhlA,hypA-hypB-hypC-hypD-hypE 0.612 16
hypB-hypC-hypD-hypE-fhlA,hypB-hypC-hypD-hypE 0.612 16
prfC 0.563 18
ybhR-ybhS-ybhF-ybhG-ybiH,ybhF-ybhG-ybiH 0.561 19
rhlE 0.561 19
ihfA-pheT-pheS-pheM,pheM 0.550 21
rhsE-ydcD 0.538 22
stpA 0.516 23
alaE 0.516 23
nudE 0.496 25
yrfF 0.496 25
sibC 0.480 27
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB 0.478 28
rrlB-rrfB,rrlB 0.472 29
sspB-sspA 0.472 30
smf 0.432 31
def-fmt-rsmB,def-fmt,def-fmt-rsmB-trkA 0.432 31
yhjA 0.424 33
treF 0.424 33
yaaX 0.417 35
yjgA 0.412 36
pmbA 0.412 36
ybcN-ninE-ybcO-rusA-ylcG 0.411 38
yhiD-hdeB-hdeA,hdeB-hdeA 0.405 39
hdeD 0.405 39
sraA 0.403 41
lon-hupB,lon 0.403 41
cysG 0.402 43
gapC 0.385 44
cybB,cybB-ydcA-sokB 0.385 44
yoaD 0.381 46
yghD-yghE 0.376 47
yhdV 0.363 48
yddB-yddA,yddA 0.361 49
yebO,cspC-yobF-yebO 0.360 50
fecA-fecR-fecI,fecR-fecI 0.352 52
ykiE 0.352 52
insA-7 0.352 52
yebO-mgrB,mgrB 0.346 54
yobH 0.346 54
hns 0.345 56
gldA-fsaB-frwA 0.339 57
frwC-frwB 0.339 57
trpS-gph-rpe-dam-damX-aroB-aroK,dam-damX-aroB-aroK,damX-aroB-aroK 0.337 59
frwD 0.332 60
yacG-zapD-coaE 0.325 62
yacM 0.325 62
guaC 0.325 62
wzxB-rfbC-rfbA-rfbD-rfbB,rfbC-rfbA-rfbD-rfbB 0.322 64
hupA,hupA-yjaH 0.317 65
yjaH 0.317 65
ygaU 0.317 68
yqaE,ygaU-yqaE 0.317 68
ygaV-ygaP 0.317 68
yajR 0.316 70
torR 0.316 71
torC-torA-torD 0.316 71
nrdH-nrdI-nrdE-nrdF 0.314 73
yqcA-truC-yqcC 0.313 74
truC-yqcC-csrB 0.313 74
yiaT 0.312 76
yiaU 0.312 76
uidC-uidB-uidA 0.307 78
yjaZ 0.304 79
yqhC 0.295 80
yqhD-dkgA 0.295 80
ilvE-ilvD,ilvE-ilvD-ilvA 0.294 82
htpG,htpG-adk 0.292 83
yjhU 0.286 84
treR 0.285 85
yecJ-azuC,azuC 0.284 86
yecR 0.284 86
yecJ 0.283 88
sixA 0.283 89
ycgH 0.282 90
yncD 0.279 91
yncE 0.279 91
opgE 0.272 94
rybA-mntS 0.272 94
mntR,mntR-ybiR 0.272 94
ompA 0.268 96
rob 0.265 97
creA-creB-creC,creA-creB,creA-creB-creC-creD 0.265 97
ftnA 0.264 99
ldtC 0.264 100
ycfQ 0.263 101
yihA 0.257 103
csrC 0.257 103
yihI,yihI-hemN 0.257 103
tufA-fusA 0.256 105
lipB 0.255 106
ompG 0.254 107
iclR 0.251 108
metH 0.251 108
frvR-frvX-frvB-frvA 0.251 110
ilvA 0.250 111
nrdG 0.247 112
yeaC-msrB,msrB 0.247 113
gapA,gapA-yeaD 0.247 113
yfgA-rlmN,rlmN 0.246 115
cusS-cusR 0.245 116
cusC-cusF,cusC-cusF-cusB-cusA 0.245 116
guaD-ghxQ 0.244 118
wcaB-wcaA-wzc-wzb-wza 0.242 119
yegH 0.242 119
umpH-nagC-nagA-nagB,nagC-nagA-nagB 0.237 121
nagE 0.237 121
bhsA 0.233 123
ygcU 0.233 124
ftsN-cytR,cytR 0.228 125
allS 0.226 126
allA 0.226 126
cadA-cadB 0.223 128
yaeH 0.222 129
allR,allR-gcl-hyi 0.221 130
yfbM 0.221 131
gcvP 0.220 132
aldA 0.217 133
pabB-nudL 0.216 134
clpB 0.215 135
ryfD 0.215 135
yneO 0.211 137
ymgF 0.211 138
yjhZ 0.205 139
yjhR 0.205 139
csiE 0.203 141
adeQ 0.203 142
adeD 0.203 142