Top Promoters Bound by gadW

On this page you can access the list of promoter regions bound by gadW. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
slp-dctR 1.000 1
rrfF-thrV-rrfD-rrlD-alaU-ileU-rrsD,alaU-ileU-rrsD,rrsD 0.703 2
yrdA 0.703 3
copA 0.524 4
glsA-ybaT 0.524 4
gadW 0.402 6
gadY 0.402 6
ybiU 0.400 8
sfmH-sfmF 0.343 9
ryeG 0.293 10
yodE 0.293 11
narL-narX 0.262 12
narK 0.262 12
ynjH 0.252 14
gdhA 0.252 14
torI 0.250 16
yiiS-uspD 0.245 17
pbl 0.244 18
ygeI 0.244 19
uspC 0.244 20
insB-5-insA-5-insAB5 0.244 21
murI,murI-rrsB-gltT 0.241 22
ytfI 0.239 23
pgi 0.238 24
ydfV 0.233 25
flxA 0.233 26
rem-hokD-relE-relB,hokD-relE-relB,relE-relB 0.233 27
baeR-yegP 0.231 28
ydfA-ydfB-ydfC 0.223 29
argQ-argZ-argY-argV-serV 0.214 30
cysH-cysI-cysJ 0.213 31
queD,queD-ygcN-ygcO 0.213 31
yeaP-yoaJ-yoaK,yeaP 0.211 33
yoaF 0.211 34
glyS-glyQ 0.211 35
wecH 0.211 35
ysaB 0.211 37
aidB 0.211 38
sdaC-sdaB,sdaC,sdaC-sdaB-ygdG 0.209 39
gadC-gadB 0.194 40
rplQ-rpoA-rpsD-rpsK-rpsM-rpmJ 0.194 41
zntR-yhdN-rplQ-rpoA-rpsD-rpsK-rpsM,yhdN-rplQ-rpoA-rpsD-rpsK-rpsM,rplQ-rpoA-rpsD-rpsK-rpsM 0.194 42
yafN-yafO-yafP 0.191 43
yiaT 0.182 44
yiaU 0.182 45
pgk,fbaA-pgk,mscS-fbaA-pgk 0.180 46
yoaD 0.179 47
ycgJ 0.179 48
minE-minD-minC 0.179 49
ompN-pfo,pfo 0.175 50
ydbJ 0.175 50
narV-narW-narY-narZ 0.173 52
yjeN-yjeO 0.173 53
hlyE 0.173 54
umuD-umuC 0.173 55
treA 0.173 56
yihI,yihI-hemN 0.172 57
dhaM-dhaL-dhaK 0.168 58
dhaR 0.168 59
yghX 0.167 61
yqhI 0.167 61
gpr 0.167 61
tsr 0.166 63
yjiA-yjiX-yjiY,yjiX-yjiY,yjiY 0.166 64
insH-10 0.166 65
ybhK 0.166 66
moaA-moaB-moaC-moaD-moaE 0.166 67
mcbA 0.162 68
rlmF 0.162 68
rydC 0.161 70
yncP 0.161 71
ydcA 0.161 72
yjeM,yjeM-yjeN-yjeO 0.161 73
sufD-sufC-sufB-sufA,sufE-sufS-sufD-sufC-sufB-sufA 0.158 74
pgpA 0.158 75
helD 0.155 76
ycgV 0.153 77
hyfA-hyfB-hyfC-hyfD-hyfE-hyfF-hyfG-hyfH-hyfI-hyfJ-hyfR-focB 0.150 78
guaA 0.150 79
yoaE 0.149 80
yoaL 0.149 81
manX-manY-manZ,manX-manY-manZ-yobD 0.149 81
fxsA 0.147 83
cutA-dcuA-aspA,dcuA-aspA,aspA 0.147 84
hcaR 0.145 85
hcaE-hcaF-hcaC-hcaB-hcaD 0.145 86
adhE 0.142 87
ychT 0.142 88
ychE 0.142 89
oppA5p 0.142 89
ydiU 0.141 91
yaiA-aroM 0.140 92
dtpA 0.139 93
mntH 0.138 94
nupC,nupC-insL-3 0.138 95
yhjE 0.138 96
puuC-puuB-puuE 0.136 97
aceB-aceA-aceK,aceB-aceA 0.134 98
yfdK-yfdL-yfdM-yfdN-oweS 0.134 99
yfdP-yfdQ 0.134 99
mntP 0.133 101
yfjJ 0.131 102
wbbH-glf 0.128 103
narG,narG-narH-narJ-narI 0.128 104
pagP 0.128 105
ppiD-ybaV-fadM,ppiD 0.125 106
metF 0.124 107
lacA-lacY 0.123 108
ynbG 0.123 109
ydbA 0.123 110
ratB-ratA 0.122 111
smpB-ssrA,smpB 0.122 112
ygiT 0.121 113
ygiS 0.121 114
ypdK 0.121 115
glcB-glcG 0.120 116
glcA-glcB 0.120 117
intG 0.119 118
yedN 0.119 119
ruvC-yebC 0.119 120
hsrA-yieP 0.119 121
rrsC,rrsC-gltU,rrsC-gltU-rrlC-rrfC 0.119 122
pncC,recX-recA-pncC,recA-pncC 0.119 123
yncG 0.116 124
ansP 0.116 125
gntK,gntK-gntU 0.116 126
yhdJ 0.116 127
gstA 0.115 128
ydbD 0.114 129
actP-yjcH-acs,acs 0.114 130
nrfA-nrfB-nrfC-nrfD,nrfA-nrfB-nrfC-nrfD-nrfE-nrfF-nrfG 0.114 130
yebF 0.113 132
ompW 0.113 133
yciA-yciB-yciC,yciB-yciC 0.113 134
yagL-yagM 0.112 135
ykgV 0.112 136
dicB-ydfD-ydfE-insD-7-intQ 0.111 137
mraZ-rsmH-ftsL,mraZ-rsmH-ftsL-ftsI-murE-murF-mraY-murD-ftsW-murG-murC-ddlB-ftsQ-ftsA-ftsZ-lpxC 0.110 138
yhcE 0.109 139
yaiY 0.108 140
yaiZ 0.108 140
nupX 0.107 142
thrL,thrL-thrA-thrB-thrC,thrL-thrA-thrB 0.107 143
ypjB 0.107 144
rrlE,rrlE-rrfE 0.107 145
ileV-alaV,ileV 0.107 147
gltU 0.107 147
ileT-alaT 0.107 147
gltT 0.107 147
gltW 0.107 150
ileU 0.107 150
lpxC,lpxC-secM 0.107 152
sbcB 0.107 153
dacD,sbmC-dacD 0.107 154
ilvI-ilvH,ilvI-ilvH-fruR 0.106 155
mtlA,mtlA-mtlD-mtlR 0.106 156
yraI-yraJ-yraK 0.106 157
yraR,yraQ-yraR 0.103 158
yhbO 0.103 159
yabR 0.103 160
gatD-gatC-gatB-gatA-gatZ,gatC-gatB-gatA-gatZ,gatB-gatA-gatZ 0.103 161
ogrK 0.103 162
yfcO-yfcP-yfcQ-yfcR-yfcS-yfcU 0.103 163
folC-accD-dedA,accD-dedA 0.103 164
nudL-sdaA 0.102 165
blc 0.102 166
yqgE-yqgF 0.102 167
yaaY 0.102 168
insB-1-insA-1-insAB1 0.102 169
yqhC 0.101 170
yqhD-dkgA 0.101 170
ytfH 0.100 172