Top Promoters Bound by gadW

On this page you can access the list of promoter regions bound by gadW. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
slp-dctR 1.000 1
rrfF-thrV-rrfD-rrlD-alaU-ileU-rrsD,alaU-ileU-rrsD,rrsD 0.703 2
yrdA 0.703 2
copA 0.524 4
glsA-ybaT 0.524 4
gadW 0.402 6
gadY 0.402 6
ybiU 0.400 8
sfmH-sfmF 0.343 9
yodE 0.293 10
ryeG 0.293 10
narL-narX 0.262 12
narK 0.262 12
ynjH 0.252 14
gdhA 0.252 14
torI 0.250 16
yiiS-uspD 0.245 17
ygeI 0.244 18
pbl 0.244 18
insB-5-insA-5-insAB5 0.244 20
uspC 0.244 20
murI,murI-rrsB-gltT 0.241 22
ytfI 0.239 23
pgi 0.238 24
rem-hokD-relE-relB,hokD-relE-relB,relE-relB 0.233 26
ydfV 0.233 26
flxA 0.233 26
baeR-yegP 0.231 28
ydfA-ydfB-ydfC 0.223 29
argQ-argZ-argY-argV-serV 0.214 30
cysH-cysI-cysJ 0.213 31
queD,queD-ygcN-ygcO 0.213 31
yoaF 0.211 33
yeaP-yoaJ-yoaK,yeaP 0.211 33
glyS-glyQ 0.211 36
ysaB 0.211 36
wecH 0.211 36
aidB 0.211 38
sdaC-sdaB,sdaC,sdaC-sdaB-ygdG 0.209 39