Top Promoters Bound by gcvA

On this page you can access the list of promoter regions bound by gcvA. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs)	Scores	Ranks

yicG	1.000	1
gcvH-gcvT,gcvP-gcvH-gcvT	0.961	2
yqfI	0.961	2
sdaA,sdaA-yoaD	0.826	4
infB	0.803	5
insF-2-insE-2-insEF2	0.553	6
sdiA	0.508	7
sdsN	0.508	8
ydjO	0.463	9
katE	0.456	10
yjcF	0.456	11
frlA-frlB-frlD-yhfR-frlC	0.447	12
ung	0.436	13
grcA	0.436	14
gltF	0.411	15
kgtP	0.391	16
yfiS	0.391	17
ydeO	0.357	18
ydeO-safA	0.357	19
yciS-yciM,yciS-yciM-pyrF-yciH	0.340	20
ybiJ	0.340	21
croE-ymfL-ymfM-ymfN-ymfR-beeE-jayE-ymfQ-stfP-tfaP	0.321	22
stpA	0.317	23
yeaI	0.315	24
hscC	0.310	25
rlmM-ygdD-gcvA,gcvA,ygdD-gcvA	0.304	26
gcvB	0.304	26
ldrB	0.295	28
ldrA	0.295	29
ldrC	0.295	29
rdlA	0.295	31
rdlC	0.295	31
hchA	0.295	33
luxS	0.292	34
micA	0.292	35
bolA	0.292	36
ybfK	0.279	37
rpsO,pnp-rpsO	0.272	38
pnp	0.272	39
yehE-mrp,mrp	0.270	40
metG	0.270	41
higA-higB	0.268	42
yeaJ	0.267	43
ynfU	0.262	44
rzpQ-rrrQ-ydfR-essQ	0.262	45
yqjC-yqjD-yqjE-yqjK	0.259	46
mdtK	0.257	47
ribC	0.257	48
mdtP-mdtO-mdtN	0.253	49
rdlB	0.245	50
speD	0.240	51
yicU	0.239	52
yibX	0.220	53
lrhA	0.217	54
ybiA	0.217	55
dinG	0.217	56
ylbI	0.215	57
yidL	0.214	58
yidJ-yidK	0.214	59
yhcA-yhcD	0.208	60
tfaX	0.208	61
menE-menC-menB-menH-menD,menB-menH-menD	0.204	62
rclC-rclB-rclA	0.203	63
ykgD	0.203	63
ptrB	0.202	65
yfgO	0.200	66
bepA-yfgD	0.200	67
pppA	0.199	68
msyB-mdtG-lpxL,lpxL	0.193	69
yceA	0.193	69
fimB	0.190	71
yadN	0.189	72
yjjQ-bglJ	0.188	73
yehF	0.187	74
tig-clpP-clpX,tig	0.184	75
zntR-yhdN,zntR-yhdN-arfA	0.183	76
yaiX	0.182	77
ybcJ-folD	0.181	78
sfmA	0.181	78
rhaS-rhaR	0.178	80
rhaD-rhaA-rhaB	0.178	81
ydgU	0.177	82
ydgD	0.177	82
ykfI-yafW-ykfG-yafX-ykfF-ykfB-yafY-ykfH	0.177	84
baeS-baeR	0.176	85
ydaS-ydaT-ydaU-ydaV-ydaW-rzpR	0.176	86
yhjX	0.175	87
ynbA-ynbB-ynbC-ynbD	0.173	88
ybgV	0.173	89
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX	0.173	90
ybgU	0.173	91
gltA	0.173	92
ycdT	0.168	93
rssB-galU,rssB	0.168	94
narU	0.167	95
eptB	0.167	96
ycgV	0.166	97
sraA	0.164	98
lon-hupB,lon	0.164	99
pntB-pntA	0.164	100
ydgH,ydgH-ydgI-folM	0.164	101
yjhC	0.163	102
gstB	0.162	103
dacC	0.162	103
dusB-fis	0.160	105
yfhG-glrK-glmY,glmY	0.159	106
glrK	0.159	107
yicI-yicJ	0.159	108
selC	0.159	108
lolA-rarA	0.159	110
yhcE	0.158	111
cutC	0.152	112
yjhG-yjhH-yjhI	0.152	113
aceB-aceA-aceK,aceB-aceA	0.151	114
ugd	0.151	115
intG	0.150	116
uspB	0.150	117
uspA	0.150	118
yafN-yafO-yafP	0.148	119
yaaY	0.146	120
ribF-ileS,ribF-ileS-lspA-fkpB-ispH	0.146	120
insA-1-rpsT,rpsT	0.146	122
waaZ-waaY	0.145	123
cpxA-cpxR	0.143	124
cpxP	0.143	125
mscL	0.143	126
ygbJ-ygbK,ygbJ-ygbK-ygbL-ygbM	0.142	127
yrhB	0.140	128
yjiP	0.140	129
yjiN-mdtM	0.140	130
ldtA	0.139	131
minE-minD	0.138	132
yihL-yihM-yihN,yihL-yihM	0.136	133
crfC-yjcZ	0.136	134
yjdM	0.136	135
trkH-hemG	0.135	136
blc	0.135	137
fucP-fucI-fucK-fucU-fucR	0.135	138
yhdU	0.135	139
ycaK	0.134	140
ycgG	0.134	141
betA-betB-betI	0.132	142
betT	0.132	142
lptA-lptB,lptA-lptB-rpoN,lptA-lptB-rpoN-hpf	0.131	144
livF-livG-livM-livH-livK,livG-livM-livH-livK,livM-livH-livK	0.130	145
panM	0.130	146
rutG-rutF-rutE-rutD-rutC-rutB-rutA	0.130	147
rutR	0.130	147
flhE-flhA-flhB	0.130	149
recC-ppdC-ygdB-ppdB-ppdA	0.130	150
ygeH	0.129	151
yibY	0.128	152
kch	0.127	153
adiC	0.125	154
guaD-ghxQ	0.124	155
leuU	0.124	156
mug-yqjH,yqjH	0.123	157
yqjI	0.123	157
rcsB	0.123	159
mutL-miaA-hfq-hflX-hflK-hflC,mutL-miaA-hfq	0.122	160
yjbJ	0.122	161
ybgI-ybgJ-ybgK-ybgL,ybgI-ybgJ-ybgK-ybgL-nei	0.121	162
dtpD	0.121	163
hemA,hemA-prfA-prmC	0.121	164
dauA-prsA-ispE-lolB,prsA-ispE-lolB	0.121	165
lfhA	0.120	166
lafU	0.120	167
icd	0.119	168
nudJ-rluE	0.119	169
atpA-atpH-atpF-atpE-atpB,atpC-atpD-atpG-atpA-atpH-atpF-atpE-atpB,atpH-atpF-atpE-atpB	0.119	170
yebY-yebZ-yobA	0.119	171
yobB-exoX	0.119	172
holE,holE-yobB-exoX	0.119	173
yjgL	0.118	174
lpp	0.118	175
gfcD-gfcC	0.117	176
yejG	0.117	177
yihG	0.117	178
polA-spf,polA	0.117	178
glnE-ygiF	0.116	180
ygiM,ygiM-cca	0.116	181
yqiA-cpdA-yqiB-nudF,cpdA-yqiB-nudF,parE-yqiA-cpdA-yqiB-nudF	0.116	182
tolC,tolC-ygiB-ygiC,tolC-ygiA-ygiB-ygiC,tolC-ygiA-ygiB	0.116	183
sufD-sufC-sufB-sufA,sufE-sufS-sufD-sufC-sufB-sufA	0.116	184
rhsC-ybfB	0.116	185
yihQ	0.115	186
ycgJ	0.115	187
minE-minD-minC	0.115	188
acpH	0.115	189
queA-tgt-yajC,queA	0.115	190
ygeA-araE,araE	0.114	191
gmhA,gmhA-yafJ	0.114	192
yodE	0.114	193
ryeG	0.114	194
insO	0.114	195
yjhD	0.114	196
fliY-fliZ-fliA	0.113	197
add	0.112	198
mdh	0.112	199
argR	0.112	199
ptsG	0.112	201
mpaA-ycjY-ymjC-ymjD,ycjY	0.111	202
ycjZ	0.111	203
appY	0.110	204
tfaQ-stfQ-nohQ	0.110	205
ydfO-ynfO	0.110	205
rrfG	0.109	207
msyB	0.109	208
sroH	0.109	209
ygjQ	0.107	210
rluC	0.107	211
yceQ	0.107	212
rne	0.107	213
sbcB	0.107	214
dacD,sbmC-dacD	0.107	215
ybdR	0.106	216
pflB-focA,focA	0.106	217
tynA	0.105	218
bglX	0.104	219
dld	0.104	219
fabA	0.103	221
yfgH-yfgI	0.103	222
zwf	0.103	223
yebK-pykA,yebK	0.103	223
fabA-ycbZ,ycbZ	0.103	225
matP	0.103	225
livJ	0.103	227
nc1	0.102	228
intF	0.102	229
rpoS-nlpD	0.101	230
kdsC-lptC,kdsC-lptC-lptA-lptB	0.101	231
ecpA	0.101	232
ftnA	0.100	233