Top Promoters Bound by iclR

On this page you can access the list of promoter regions bound by iclR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
ykfC 1.000 1
iclR 0.888 2
metH 0.888 2
yciS-yciM,yciS-yciM-pyrF-yciH 0.753 4
fecA-fecR-fecI,fecR-fecI 0.637 6
ykiE 0.637 6
insA-7 0.637 6
waaH-tdh-kbl,tdh-kbl 0.604 8
aceB-aceA-aceK,aceB-aceA 0.578 9
agaR 0.569 10
kbaZ-agaV-agaW-agaA 0.569 10
yjeJ 0.544 12
araD-araA-araB,araA-araB 0.536 13
araC,araC-yabI 0.536 13
yiiF 0.482 15
ybiJ-ybiI-ybiX-ybiL,ybiI-ybiX-ybiL,ybiL 0.465 16
uvrB 0.461 17
ansB 0.457 18
yhhZ-insA-6-insB-6-insAB6 0.457 19
recB 0.445 20
ycaC 0.438 21
ycaD 0.438 21
glnE-ygiF 0.434 23
ygiM,ygiM-cca 0.434 23
yfaP-yfaQ-yfaT-yfaA-yfaS 0.432 25
gpp 0.417 26
micL 0.388 27
rybB 0.387 28
grpE 0.386 29
nadK-recN,nadK 0.386 29
speD 0.378 31
ileY 0.377 32
ygaQ 0.377 32
nac 0.373 34
asnV 0.373 34
serT 0.369 36
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF 0.369 36
cirA 0.364 38
ygdT 0.351 39
mutH 0.351 39
galS 0.345 41
yifB 0.344 42
ilvL-ilvM-ilvE-ilvD-ilvA-ilvG-ilvX,ilvL,ilvL-ilvM-ilvE-ilvG-ilvX 0.344 42
cadC 0.343 44
mcbA 0.340 45
rlmF 0.340 45
opgC 0.338 47
opgG-opgH 0.338 47
yceI-yceJ 0.331 49
yfgH-yfgI 0.329 50
ybdM 0.328 51
yhcC 0.325 52
gltB-gltD-gltF 0.325 52
yicL 0.322 54
ynaJ 0.320 55
sfmC-sfmD 0.318 56
ybhK 0.313 57
moaA-moaB-moaC-moaD-moaE 0.313 57
glk 0.313 59
yfeO 0.313 59
serA,serA-ibsC 0.308 61
trpA-trpB-trpC-trpD-trpE-trpL,trpD-trpE-trpL,trpL 0.306 62
yciV-yciO,yciV-yciO-yciQ 0.306 62
cspD 0.297 65
yljB 0.297 65
clpS,clpS-clpA 0.297 65
ydeA 0.296 67
ymgF 0.295 68
yeiQ 0.295 69
yeeJ 0.294 70
ycgH 0.286 71
mnmG-mioC-asnC,mioC-asnC,asnC 0.286 72
asnA 0.286 72
pyrD 0.286 74
gntP 0.285 75
uxuA-uxuB 0.285 75
ansP 0.285 77
yncG 0.285 77
proC 0.285 79
yaiI-aroL-yaiA-aroM-yaiE-ykiA,yaiI-aroL-yaiA,yaiI 0.285 79
aroB 0.285 81
yihD,yihD-srkA-dsbA,yihD-srkA 0.283 82
malI 0.283 83
malX-malY 0.283 83
ileS-lspA,ileS-lspA-fkpB-ispH,ileS,ileS-lspA-fkpB 0.283 85
shoB 0.282 86
ohsC 0.282 86
ompL 0.281 88
yhhW-yhhX,yhhX 0.281 90
ryhB 0.281 90
yhhY 0.281 90
ldtE 0.279 92
pheU 0.275 93
cutC 0.274 94
sra 0.273 96
sra-bdm 0.273 96
osmC 0.273 96
cvrA-ldcA,ldcA 0.272 98
yqfG 0.270 99
idi 0.270 99
ihfA-pheT-pheS-pheM-rplT-rpmI-infC-thrS,pheM-rplT-rpmI-infC-thrS,rplT-rpmI-infC-thrS,thrS,infC-thrS 0.268 101
arpB 0.268 101
lipA 0.268 103
hokA 0.267 105
insJ 0.267 105
insJK 0.267 105
insK 0.267 105
ynfK 0.267 108
uhpC-uhpB-uhpA-ilvN-ilvB-ivbL,uhpA-ilvN-ilvB-ivbL,ivbL,ilvN-ilvB-ivbL 0.263 109
alsE-alsC-alsA-alsB-rpiR,alsA-alsB-rpiR,alsB-rpiR,rpiR 0.261 110
rpiB,rpiB-yjdP 0.261 110
yjfY 0.261 112
rpsF-priB-rpsR-rplI 0.261 112
nmpC 0.259 114
essD-rrrD-rzpD 0.259 114
asmA-dcd-udk,dcd-udk 0.257 116
yegE 0.257 116
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT 0.256 118
livF-livG-livM-livH-livK,livG-livM-livH-livK,livM-livH-livK 0.253 119
panM 0.253 119
umpH 0.249 121
lpxD 0.249 122
apaH-apaG 0.248 123
yfeA 0.247 124
yddM 0.247 125
yhgE 0.247 126
pck 0.247 126
fecE-fecD-fecC-fecB-fecA,fecC-fecB-fecA,fecB-fecA 0.244 128
astE-astB-astD-astA-astC 0.243 129
xthA 0.243 129
rem 0.242 131
yadC-yadK-yadL-yadM 0.239 132
yjaB 0.239 133
metA 0.239 133
ydiV 0.237 135
hofP-hofO-hofN-hofM 0.236 136
mrcA 0.236 136
cyoD-cyoC-cyoB-cyoA,cyoE-cyoD-cyoC-cyoB-cyoA 0.236 138
tpiA 0.235 139
yiiR 0.235 139
lit 0.234 141
etk-etp-gfcE 0.232 142
yhdV 0.230 143
rhsD-ybbC-rhsH-ybbD 0.230 144
ybiX 0.229 145
ybhN-clsB-ybhP 0.229 146
ybhQ 0.229 146
pheV 0.227 148
serC-aroA-ycaL,serC,serC-aroA 0.225 149
ydcH 0.225 150
grcA 0.224 151
ung 0.224 151
yqiM 0.223 153
yqjA-mzrA,yqjA-mzrA-yqjC-yqjD 0.223 153
aroP 0.222 155
pdhR,pdhR-aceE-aceF-lpd 0.222 155
ubiX 0.221 157
yfdV 0.221 158
yphB-yphC 0.220 159
yjhF 0.219 160
yfgO 0.218 161
bepA-yfgD 0.218 161
yfcI 0.217 163
gshB-yqgE-yqgF 0.217 164
yhjC,yhjC-yhjD 0.216 165
trxB 0.215 166
lrp 0.215 166
gltA 0.215 168
mug-yqjH,yqjH 0.215 169
yqjI 0.215 169
bglX 0.215 171
dld 0.215 171
yhfA 0.215 173
crp,crp-yhfK 0.215 173
fucP-fucI-fucK-fucU-fucR 0.212 175
mdtI-mdtJ 0.210 177
ydgV 0.210 177
tqsA 0.210 177
yciA-yciB-yciC,yciB-yciC 0.209 179
ompW 0.209 179
yoeA 0.209 181
yafT 0.209 182
phoU-pstB 0.208 183
dctA 0.207 184
ogt-abgT-abgB-abgA 0.207 185
abgR 0.207 185
tpr-tyrV-tyrT-purU-ychJ-rttR,tyrV-tyrT-purU-ychJ,ychJ 0.207 187
nanS 0.206 188
psd-rsgA,rsgA 0.204 189
orn-glyV-glyX-glyY,orn 0.204 189
yfjV 0.204 191
ygbF-ygbT-casE-casD 0.204 192
insB9 0.204 193
insA9 0.204 193
ompN 0.204 195
micC 0.204 195
ygaC 0.203 197
ygaM 0.203 197
yncC 0.202 199
yjbQ-yjbR 0.202 200
tnaC,tnaC-tnaA 0.202 201
fabI,yciW-fabI 0.202 202
nc7 0.202 202
galP 0.202 204
zapC 0.202 205
ydhQ 0.201 207
valV-valW 0.201 207
ydhR 0.201 207
pflD-pflC 0.200 209