Top Promoters Bound by iscR

On this page you can access the list of promoter regions bound by iscR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
ptsH-ptsI-crr,ptsH,ptsH-ptsI 1.000 1
ldtC 0.635 2
hybG-hybF-hybE-hybD-hybC-hybB-hybA-hybO,hybB-hybA-hybO,hybA-hybO 0.541 3
sodB 0.523 4
ypdK 0.408 5
intF 0.406 6
alaC 0.399 7
ypdA-ypdB-ypdC 0.399 8
ribB 0.377 9
yqiC,yqiC-ygiL 0.377 10
G0-10706 0.338 11
ytfL 0.338 12
dctA 0.326 13
caiF 0.302 14
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN 0.297 15
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH,rplO-rpmD-rpsE-rplR-rplF-rpsH 0.297 16
rhaT 0.265 17
sodA-kdgT,sodA 0.265 17
yebV 0.258 19
yebW 0.258 20
cysS 0.257 21
purK-purE-lpxH-ppiB,lpxH-ppiB,ppiB 0.257 22
nrfA-nrfB-nrfC-nrfD,nrfA-nrfB-nrfC-nrfD-nrfE-nrfF-nrfG 0.256 23
actP-yjcH-acs,acs 0.256 24
serT 0.251 25
hyaA-hyaB-hyaC-hyaD-hyaE-hyaF 0.251 26
yneP 0.250 27
tusE-yccA,yccA 0.245 28
ppa 0.238 29
ytfQ-ytfT-yjfF-ytfR 0.238 29
pflB 0.230 31
insB-1-insA-1-insAB1 0.214 32
yjiK-yjiL-yjiM-ytiA,yjiL-yjiM 0.192 33
insH-9 0.192 34
yghO 0.192 35
ynfS 0.184 36
cspB 0.184 37
cspF 0.184 37
lrhA 0.183 39
insC-5-insD-5-yqiH-yqiI-insCD5 0.179 40
yqiG 0.179 41
yecT 0.175 42
rluC 0.174 43
ybgS 0.167 44
aroG 0.167 44
allR,allR-gcl-hyi 0.167 46
rpsI-rplM-zapE,zapE 0.166 47
yhcB,yhcB-degQ 0.166 47
micL 0.166 49
iadA-yjiG-yjiH 0.163 50
kptA 0.163 50
minE-minD-minC 0.163 52
ycaR-kdsB,ycaR-kdsB-ycbJ 0.161 53
allS 0.161 54
ycgJ 0.161 55
ydcK 0.154 56
tehA-tehB,tehA 0.154 57
glnA3p 0.153 58
rfbD-rfbB-wcaN,wcaN 0.153 59
rsxA-rsxB,rsxA-rsxB-rsxC-rsxD-rsxG-rsxE-nth 0.152 60
ydgK-rsxA-rsxB-rsxC-rsxD-rsxG-rsxE-nth,ydgK-rsxA-rsxB 0.152 61
ydfK-ynfT 0.152 62
leuO 0.150 63
leuD-leuC-leuB-leuA-leuL,leuL 0.150 64
yajD 0.147 65
rzpQ-rrrQ-ydfR-essQ 0.146 66
ynfU 0.146 66
ttdR 0.146 68
ttdA-ttdB-ttdT 0.146 68
yniA 0.146 70
arsR-arsB-arsC 0.145 71
idnR 0.144 72
nfrA-nfrB,nfrB 0.144 73
ytfH 0.142 74
ytfF-qorB,qorB 0.142 75
flhE-flhA-flhB 0.142 76
waaH 0.140 77
gstB 0.139 78
dacC 0.139 78
ypjI 0.138 80
ydcL-insQ,ydcL 0.137 81
ybjD 0.136 82
aqpZ 0.136 83
yafS 0.135 84
mltD 0.135 85
yciE 0.134 86
ycgV 0.133 87
bcsQ 0.133 89
bcsQ-yhjR,yhjR 0.133 89
bcsE-bcsF,bcsE-bcsF-bcsG 0.133 89
csgG-csgF-csgE-csgD,csgF-csgE-csgD 0.132 91
cydA-cydB-ybgE-cydX,cydA-cydB,cydA-cydB-ybgE-ybgC-cydX,cydA,cydA-cydB-cydX 0.131 92
nadC 0.130 93
feaR 0.129 94
feaB 0.129 94
smpB-ssrA,smpB 0.128 96
ratB 0.128 97
yjhV 0.127 98
fadD 0.127 99
rhlE 0.125 100
ybhR-ybhS-ybhF-ybhG-ybiH,ybhF-ybhG-ybiH 0.125 101
ydeO 0.125 102
ycgX 0.124 103
ytfI 0.123 104
cyaR 0.122 105
yacH 0.121 106
acnB,acnB-yacL 0.121 106
pflB-focA,focA 0.120 108
yfeA 0.119 109
ygcW 0.119 110
yqcE-ygcE 0.119 111
dapD-glnD-map,glnD-map,map 0.119 113
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff 0.119 113
rpsB-tsf,rpsB-tsf-pyrH-frr 0.119 113
yciI 0.116 115
tonB 0.116 115
insH-6 0.114 117
glvG-glvB-glvC 0.113 118
yidP 0.113 118
yecJ-azuC,azuC 0.112 120
yecR 0.112 120
ftnA 0.112 122
insH-8 0.111 124
yejO 0.111 124
narP 0.111 124
ybeM 0.109 126
fieF-pfkA,fieF 0.109 127
cpxQ 0.109 128
glrK 0.109 129
ykgP 0.108 130
eaeH-insE-1-insF-1-insEF1 0.108 131
ybcH-nfrA,nfrA 0.108 132
yaiL 0.107 133
yjdM 0.105 134
crfC-yjcZ 0.105 134
bglG,bglB-bglF-bglG 0.104 136
torC-torA-torD 0.102 137
torR 0.102 138
insC-1-insD-1 0.101 139
insC-1-insD-1-insCD1 0.101 139
yaiO 0.101 141
araG-araF-araH 0.101 142
bisC 0.101 143
yiaD 0.101 144
fes-entF-fepE-ybdZ,fes-ybdZ 0.101 145
entD-fepA,fepA 0.101 146
yghR-yghS 0.100 147
yghT 0.100 148