Top Promoters Bound by matA

On this page you can access the list of promoter regions bound by matA. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
matA 1.000 1
ykgL 1.000 1
hemF 0.766 3
pabC-yceG-tmk,pabC-yceG-tmk-holB-ycfH 0.658 4
bisC 0.495 5
yiaD 0.495 5
dapE-ypfN 0.413 7
ynjF 0.308 8
pgpA 0.296 9
ogt-abgT-abgB-abgA 0.292 10
abgR 0.292 10
plaP 0.290 12
plaP-yoeI 0.290 12
yphB-yphC 0.276 14
yphD-yphE-yphF 0.263 15
argC-argB-argH 0.261 16
ttdA-ttdB-ttdT 0.242 17
yafU 0.241 18
alkB 0.219 19
gltX 0.218 20
valU-valX-valY-lysV 0.218 20
yedK 0.217 22
yneE 0.210 23
ymcE-gnsA 0.204 24
gnsA 0.203 25