Top Promoters Bound by melR

On this page you can access the list of promoter regions bound by melR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
ygcW 1.000 1
yqcE-ygcE 1.000 1
phoU-pstB-pstA-pstC-pstS,pstB-pstA-pstC-pstS,pstA-pstC-pstS,pstS 0.567 3
ysaA-yiaJ,yiaJ 0.491 4
yiaK-yiaL-yiaM-yiaN-yiaO-lyxK-sgbH-sgbU-sgbE 0.491 4
melR 0.477 6
melA-melB 0.477 7
ykfN 0.476 8
crr 0.439 9
cusS-cusR 0.396 10
cusC-cusF,cusC-cusF-cusB-cusA 0.396 11
fabI,yciW-fabI 0.394 12
yijF 0.391 13
cspE 0.373 14
dhaM 0.363 15
nudG-gdhA,nudG 0.358 16
ynjF 0.358 17
nlpE 0.345 18
yeaI 0.334 19
zntR-yhdN,zntR-yhdN-arfA 0.321 20
srlR,srlR-srlQ 0.312 21
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.309 22
serB-radA-nadR,serB-radA,serB 0.302 23
lplA-ytjB 0.302 24
gtrA-gtrB-gtrS 0.300 25
pbpG 0.288 26
sdaA,sdaA-yoaD 0.279 27
ibpA,ibpB-ibpA 0.276 28
yidQ 0.276 28
yqhG 0.273 30
yhhA 0.272 31
ggt 0.272 32
ychE 0.267 33
oppA5p 0.267 34
sdsR,pphA-sdsR 0.263 35
yehF 0.259 36
tpr-tyrV-tyrT-purU-ychJ-rttR,tyrV-tyrT-purU-ychJ,ychJ 0.254 37
rssA,rssA-rssB,rssA-rssB-galU 0.254 37
yfcF 0.253 39
folX-yfcH 0.253 40
mcrC-mcrB 0.252 41
proV-proW-proX 0.252 42
ykgE-ykgF-ykgG 0.250 43
yacL 0.246 44
lipB-ybeD-dacA,dacA 0.244 45
yfbR 0.242 46
ycgZ-ymgA-ariR-ymgC,ycgZ 0.242 47
bluF 0.242 48
citB 0.242 49
fdhF 0.241 50
yjdP 0.237 51
sgcR-sgcE-sgcA-sgcQ-sgcC-sgcX-sgcB 0.236 52
lysC5p 0.230 53
yjbD 0.230 53
yfcL-epmC-yfcA-mepA-aroC-prmB,epmC-yfcA-mepA-aroC-prmB 0.223 55
smrB 0.223 56
ybgI-ybgJ-ybgK-ybgL,ybgI-ybgJ-ybgK-ybgL-nei 0.220 57
dtpD 0.220 58
pqiC 0.213 59
hybG-hybF-hybE-hybD-hybC 0.212 60
yihG 0.209 61
polA-spf,polA 0.209 62
yeeX 0.206 63
ydfO-ynfO 0.202 64
ylcI 0.202 65
ybcL-ybcM 0.202 66
yccM 0.201 67
araJ 0.198 68
yaeF 0.198 69
mtfA-asnT,mtfA 0.197 70
serU 0.197 71
yraI-yraJ-yraK 0.196 72
yeaE 0.196 73
proS-tsaA-rcsF,tsaA-rcsF 0.192 74
ptsG 0.192 75
yjfK-yjfL-yjfM-yjfC 0.191 76
yojO 0.190 77
napC-napB-napH-napG-napA-napD-napF,ccmH-dsbE-ccmF-ccmE-ccmD-ccmC-ccmB-ccmA-napC-napB-napH-napG-napA-napD-napF,napA-napD-napF 0.190 78
azoR 0.189 79
hrpA 0.189 80
ygfK-ssnA 0.189 81
ridA 0.187 82
rhsE-ydcD 0.186 83
rhtA 0.185 85
ompX-yliM 0.185 85
ompX 0.185 85
cbl 0.183 87
ycjG 0.182 88
ypaB 0.182 89
ymgA-ariR 0.181 90
ariR 0.181 91
micA 0.180 92
luxS 0.180 93
ais 0.178 94
arnB-arnC-arnA-arnD-arnT-arnF-arnE 0.178 95
yojI 0.177 96
lit 0.177 97
ymfD-ymfE 0.177 98
glmM-folP 0.176 99
frc 0.175 100
gloA-rnt,gloA 0.173 101
corA 0.171 102
yigE 0.171 103
ysgD 0.171 103
yoaC 0.171 105
yjhZ 0.168 106
ygjR 0.166 107
yebV 0.165 108
grxA 0.165 109
ybjC-nfsA-rimK-ybjN 0.165 110
ychQ-ychA-kdsA 0.165 111
otsA-otsB 0.165 112
yjhQ-yjhX,yjhP-yjhQ-yjhX 0.164 113
yqeB 0.163 114
yjhR 0.162 115
nc4 0.162 116
hscB-iscA-iscU-iscS-iscR,iscA-iscU-iscS-iscR 0.162 117
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff 0.160 118
rpsB-tsf,rpsB-tsf-pyrH-frr 0.160 119
dapD-glnD-map,glnD-map,map 0.160 120
yqfA 0.160 121
bglA 0.160 121
insI-3 0.159 123
eno 0.159 124
csrA,argZ-argY-argV-serV-csrA 0.158 125
trkH-hemG 0.158 126
yedN 0.157 127
intG 0.157 128
lpp 0.155 129
tfaQ-stfQ-nohQ 0.155 130
fliY-fliZ-fliA 0.154 131
menE-menC-menB-menH-menD,menB-menH-menD 0.154 132
xylF-xylG-xylH-xylR 0.153 133
ygeR,glyU-ygeR 0.152 134
xdhA-xdhB-xdhC,xdhA-xdhB 0.152 134
alaE 0.151 136
ylbG 0.150 137
fur-fldA-ybfE-uof,ybfE 0.150 138
rplS-trmD-rimM-rpsP,rimM-rpsP 0.150 139
rplS-trmD-rimM 0.150 140
allB 0.147 141
aslB 0.147 142
rtn 0.147 143
fdhE 0.146 144
wecA-wzzE-wecB-wecC-rffG-rffH-wecD-wecE-wzxE-wzyE-wecG-wecF,wecA-wzzE,wecA-wzzE-wecB 0.145 145
adiY 0.145 146
nirC 0.144 147
rutR 0.144 148
deoA-deoB-deoD 0.144 149
insL-1 0.142 150
dtpC 0.142 151
cvrA 0.140 152
ygbK 0.140 153
rseC-rseB-rseA,rseA 0.137 154
ftnB 0.136 155
fabA 0.136 156
yahB 0.134 157
adk 0.134 158
ppiC 0.134 159
minE-minD 0.133 160
yajR 0.132 161
dosP-dosC,dosC 0.132 162
ydcN,ydcN-ydcP 0.131 163
vsr-dcm-yedJ,dcm-yedJ,yedJ 0.130 164
rseX 0.130 164
yedJ-yedR 0.130 166
lacA-lacY 0.130 167
yafK 0.129 168
emtA 0.129 169
mnmC 0.129 170
yfcJ-fabB,fabB 0.129 171
pgk-epd,fbaA-pgk-epd 0.128 172
ryhB 0.126 173
yhhW-yhhX,yhhX 0.126 174
yhhY 0.126 175
rpsP5p 0.125 176
tgt-yajC,tgt-yajC-secD 0.125 177
yqjG 0.125 178
yqjF 0.125 179
minE-minD-minC 0.124 180
ycgJ 0.124 181
yaaA 0.124 182
dinI 0.122 183
bssS 0.122 184
mnmH,ylbG-mnmH 0.121 185
uidC-uidB-uidA 0.120 186
ypjB 0.118 187
uidR 0.117 188
recJ-dsbC-xerD,xerD,dsbC-xerD 0.116 189
yfeO 0.116 190
insI-1 0.116 192
insD-2-insC-2-insCD2 0.116 192
insI-2 0.116 192
perR 0.116 194
nudJ-rluE 0.116 195
icd 0.116 195
ybdN 0.115 197
uspC 0.114 198
puuR-puuC 0.114 199
glyV-glyX-glyY 0.114 200
yidF 0.114 201
yghR-yghS 0.113 202
yghT 0.113 203
trpS-gph-rpe,gph-rpe 0.112 204
yfjJ 0.112 205
yheS-yheT-yheU-prkB,yheS-yheT-yheU 0.112 206
kefB-kefG-yheV,kefG 0.112 207
uhpB 0.110 208
uhpC-uhpB-uhpA,uhpB-uhpA 0.110 209
yidC-mnmE,yidC 0.109 210
htpG,htpG-adk 0.109 211
sbp 0.109 212
mgsA 0.108 213
yhhZ-insA-6-insB-6-insAB6 0.108 214
kptA 0.108 215
iadA-yjiG-yjiH 0.108 216
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB 0.108 217
yicG 0.108 218
gloB 0.108 219
yafS 0.108 220
pliG 0.107 221
ycgL 0.107 221
mog 0.105 223
sfmH-sfmF 0.105 224
yeiI 0.104 225
ybaO-mdlA,ybaO 0.104 226
lplT-aas 0.104 227
ygbF-ygbT-casE-casD 0.104 228
bacA 0.103 229
yciT 0.103 230
ymiD 0.103 231
yibX 0.103 232
yibY 0.103 232
rpoN-hpf-ptsN-yhbJ-npr,rpoN-hpf-ptsN-yhbJ 0.103 234
dgsA,ynfK-dgsA 0.102 235
ydjN 0.101 236
ybfP 0.101 237
ryeA 0.101 238
hscC 0.100 239