Top Promoters Bound by melR

On this page you can access the list of promoter regions bound by melR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
ygcW 1.000 1
yqcE-ygcE 1.000 1
phoU-pstB-pstA-pstC-pstS,pstB-pstA-pstC-pstS,pstA-pstC-pstS,pstS 0.567 3
ysaA-yiaJ,yiaJ 0.491 4
yiaK-yiaL-yiaM-yiaN-yiaO-lyxK-sgbH-sgbU-sgbE 0.491 4
melR 0.477 6
melA-melB 0.477 6
ykfN 0.476 8
crr 0.439 9
cusS-cusR 0.396 10
cusC-cusF,cusC-cusF-cusB-cusA 0.396 10
fabI,yciW-fabI 0.394 12
yijF 0.391 13
cspE 0.373 14
dhaM 0.363 15
ynjF 0.358 16
nudG-gdhA,nudG 0.358 16
nlpE 0.345 18
yeaI 0.334 19
zntR-yhdN,zntR-yhdN-arfA 0.321 20
srlR,srlR-srlQ 0.312 21
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.309 22
lplA-ytjB 0.302 23
serB-radA-nadR,serB-radA,serB 0.302 23
gtrA-gtrB-gtrS 0.300 25
pbpG 0.288 26
sdaA,sdaA-yoaD 0.279 27
ibpA,ibpB-ibpA 0.276 28
yidQ 0.276 28
yqhG 0.273 30
ggt 0.272 31
yhhA 0.272 31
ychE 0.267 33
oppA5p 0.267 33
sdsR,pphA-sdsR 0.263 35
yehF 0.259 36
tpr-tyrV-tyrT-purU-ychJ-rttR,tyrV-tyrT-purU-ychJ,ychJ 0.254 37
rssA,rssA-rssB,rssA-rssB-galU 0.254 37
yfcF 0.253 39
folX-yfcH 0.253 39
mcrC-mcrB 0.252 41
proV-proW-proX 0.252 42
ykgE-ykgF-ykgG 0.250 43
yacL 0.246 44
lipB-ybeD-dacA,dacA 0.244 45
yfbR 0.242 46
bluF 0.242 47
ycgZ-ymgA-ariR-ymgC,ycgZ 0.242 47
citB 0.242 49
fdhF 0.241 50
yjdP 0.237 51
sgcR-sgcE-sgcA-sgcQ-sgcC-sgcX-sgcB 0.236 52
lysC5p 0.230 53
yjbD 0.230 53
yfcL-epmC-yfcA-mepA-aroC-prmB,epmC-yfcA-mepA-aroC-prmB 0.223 55
smrB 0.223 55
dtpD 0.220 57
ybgI-ybgJ-ybgK-ybgL,ybgI-ybgJ-ybgK-ybgL-nei 0.220 57
pqiC 0.213 59
hybG-hybF-hybE-hybD-hybC 0.212 60
yihG 0.209 61
polA-spf,polA 0.209 61
yeeX 0.206 63
ylcI 0.202 64
ydfO-ynfO 0.202 64
ybcL-ybcM 0.202 66
yccM 0.201 67