Top Promoters Bound by nrdR

On this page you can access the list of promoter regions bound by nrdR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
nrdG-nrdD 1.000 1
nrdA-nrdB-yfaE 0.634 2
ypaB 0.634 3
nrdH-nrdI-nrdE-nrdF 0.368 4
cbpM-cbpA 0.356 5
yccE 0.356 5
zur 0.338 7
yjbL-yjbM 0.338 7
betA-betB-betI 0.325 9
chiA 0.305 10
allS 0.290 11
allA 0.290 11
yegS 0.274 13
yegZ-yegR 0.274 14
lpp 0.270 15
yqfG 0.267 16
iraP-phoA,iraP 0.265 17
ddlA 0.265 18
cutA-dcuA-aspA,dcuA-aspA,aspA 0.252 19
fxsA 0.252 20
ybiA 0.243 21
dinG 0.243 21
hldE,hldE-sibD-sibE,hldE-sibE 0.242 23
oxc 0.239 24
yfcV 0.239 25
argW 0.236 26
chiP-chiQ 0.224 27
emrD 0.220 28
ysdE 0.220 29
yaaI 0.215 30
dnaK-dnaJ-insL-1,dnaK-dnaJ,dnaK 0.215 30
yneK 0.209 32
yecU 0.207 33
cysT-glyW-pgsA-uvrC-uvrY,uvrC-uvrY 0.207 34
cysB 0.203 35
pagP 0.202 36
dcuC 0.202 37
nrdG 0.201 38
yfgH-yfgI 0.194 39
uspA 0.194 40
uspB 0.194 41
hdhA,uidR-hdhA 0.193 42
cadC 0.191 43
ybfQ 0.190 44
iraM 0.185 45
ybgV 0.185 47
ybgU 0.185 47
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX 0.185 47
gltA 0.185 49
ydfK-ynfT 0.182 50
ydfJ 0.182 51
yciT 0.180 52
ymiD 0.180 52
yciT-yciZ 0.180 54
yijF 0.177 55
yfbP 0.177 56
eaeH-insE-1-insF-1-insEF1 0.177 57
ykgP 0.177 58
oweE 0.175 59
nc10 0.175 60
aaaE 0.175 60
yhcO 0.171 62
yhaH 0.169 63
prpB-prpC-prpD-prpE 0.168 64
prpR 0.168 65
cspD 0.168 67
yljB 0.168 67
clpS,clpS-clpA 0.168 67
cysS 0.166 69
purK-purE-lpxH-ppiB,lpxH-ppiB,ppiB 0.166 70
ybeQ 0.164 71
ybeR-djlB 0.164 72
yihX-yihY-dtd-yiiD 0.162 73
ais 0.159 74
arnB-arnC-arnA-arnD-arnT-arnF-arnE 0.159 74
dtpC 0.158 76
psiF 0.157 77
pinR 0.157 78
waaH-tdh-kbl,tdh-kbl 0.155 79
ybjN,ybjN-potF 0.151 80
ydjM 0.150 81
ynfE-ynfF-ynfG-ynfH-dmsD 0.149 82
modA-modB-modC,modA 0.149 83
acrZ 0.149 84
modF-modE,modE 0.149 85
yibH-yibI 0.149 86
mtlA,mtlA-mtlD-mtlR 0.149 87
artJ 0.148 88
eutM-eutD-eutT-eutQ-eutP-eutS 0.148 89
ygjH 0.146 90
ymgM 0.146 91
vsr-dcm-yedJ,dcm-yedJ,yedJ 0.145 92
rseX 0.145 93
yedJ-yedR 0.145 94
pnuC 0.145 95
sdhD-sdhA-sdhB 0.144 96
flgK-flgL 0.144 97
yhiD 0.142 98
afuC-afuB-insB-2-insA-2-insAB2 0.142 99
ynbG 0.138 100
ydbA 0.138 101
yrhA 0.137 102
yfbK 0.134 103
yfbL 0.134 103
cspB 0.134 105
cspF 0.134 105
yiiM 0.132 107
yfjH 0.131 108
yfjI 0.131 108
alpA 0.131 110
ytfL 0.130 111
G0-10706 0.130 111
gspB-gspA 0.129 113
gspC-gspD-gspE-gspF-gspG-gspH-gspI-gspJ-gspK-gspL-gspM-gspO 0.129 114
fimE 0.128 115
sucB-sucC-sucD 0.128 116
potF-potG-potH,potF-potG,potF-potG-potH-potI 0.127 117
flu 0.127 118
isrC,flu-isrC 0.127 119
nanR 0.127 120
dcuD 0.127 121
narV-narW 0.127 122
ydhI-ydhJ-ydhK,ydhI-ydhJ 0.125 123
slyA 0.125 124
sslE 0.125 125
yraI-yraJ-yraK 0.124 126
phr 0.124 127
glmS 0.123 128
cydA-cydB-ybgE-cydX,cydA-cydB,cydA-cydB-ybgE-ybgC-cydX,cydA,cydA-cydB-cydX 0.123 129
appA 0.123 130
ymgI 0.121 131
ymgH 0.121 131
zinT 0.120 133
gltX 0.120 134
valU-valX-valY-lysV 0.120 134
pflB-focA,focA 0.120 136
yaiT 0.119 137
yniD 0.119 138
arrS 0.117 139
gadE-gadF,gadE-mdtE-mdtF-gadF 0.117 139
ykgL 0.117 141
hldD-waaF-waaC,hldD-waaF-waaC-waaL 0.116 142
tdh-kbl-yibB,yibB 0.116 143
yehR 0.115 144
ydgD 0.115 145
ydgU 0.115 146
yjgM 0.114 147
yjgN 0.114 148
ymdA-ymdB-clsC,ymdA-ymdB,ymdA 0.114 149
csgC 0.114 150
hcaR-iroK 0.113 151
ymfI 0.113 152
intE-xisE-ymfH 0.113 153
ypfH-tmcA-ypfJ,tmcA-ypfJ,ypfJ 0.113 154
gntT 0.113 155
yahV 0.112 156
ybfH 0.111 157
yebE 0.111 158
ydcH 0.111 159
dapD-glnD-map,glnD-map,map 0.111 161
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff 0.111 161
rpsB-tsf,rpsB-tsf-pyrH-frr 0.111 161
micL 0.110 163
torZ-torY 0.110 164
pinH 0.110 165
sdiA 0.110 166
sdsN 0.110 167
purR 0.110 168
fdoH 0.109 169
yaeF 0.109 170
yaaY 0.107 171
ribF-ileS,ribF-ileS-lspA-fkpB-ispH 0.107 171
insA-1-rpsT,rpsT 0.107 173
yjdN 0.107 174
naRNA3 0.107 175
naRNA4 0.107 176
naRNA6 0.107 177
naRNA5 0.107 177
insB-3-insA-3-insAB3 0.107 179
parE 0.107 180
ulaR 0.107 181
cysC-cysN-cysD,ftsB-ygbE-cysC-cysN-cysD 0.106 182
iap 0.106 183
ydjO 0.106 184
frmB-frmA-frmR 0.106 185
serA,serA-ibsC 0.105 186
ygeK-ygeL 0.104 187
fruR,fruR-mraZ-rsmH-ftsL 0.103 188
yfjW 0.103 189
yfjV 0.103 190
pyrG-mazG-mazF-mazE,mazG-mazF-mazE 0.103 191
yecT 0.102 192
yecV 0.102 193
ydjX-ydjY-ydjZ-ynjA-ynjB-ynjC-ynjD,ydjX-ydjY-ydjZ-ynjA 0.102 194
ycaM 0.102 195
setC 0.102 196
acpS-pdxJ-recO-era-rnc,era-rnc,rnc 0.102 197
yibX 0.101 198
yibY 0.101 199
yadG-yadH-yadI,yadG-yadH 0.101 200
can 0.101 201
rsmJ-prlC,prlC 0.101 202
rlmJ-gor,rlmJ-gor-agrA,rlmJ 0.101 203
ydhT-ydhU-ydhX-ydhW-ydhV-ydhY,ydhW-ydhV-ydhY 0.101 204
emrY-emrK 0.101 205
evgL 0.101 206
evgA-evgS,evgA 0.101 206