Top Promoters Bound by nrdR

On this page you can access the list of promoter regions bound by nrdR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
nrdG-nrdD 1.000 1
ypaB 0.634 2
nrdA-nrdB-yfaE 0.634 2
nrdH-nrdI-nrdE-nrdF 0.368 4
cbpM-cbpA 0.356 5
yccE 0.356 5
zur 0.338 7
yjbL-yjbM 0.338 7
betA-betB-betI 0.325 9
chiA 0.305 10
allS 0.290 11
allA 0.290 11
yegZ-yegR 0.274 13
yegS 0.274 13
lpp 0.270 15
yqfG 0.267 16
ddlA 0.265 17
iraP-phoA,iraP 0.265 17
cutA-dcuA-aspA,dcuA-aspA,aspA 0.252 19
fxsA 0.252 19
ybiA 0.243 21
dinG 0.243 21
hldE,hldE-sibD-sibE,hldE-sibE 0.242 23
oxc 0.239 24
yfcV 0.239 25
argW 0.236 26
chiP-chiQ 0.224 27
ysdE 0.220 28
emrD 0.220 28
yaaI 0.215 30
dnaK-dnaJ-insL-1,dnaK-dnaJ,dnaK 0.215 30
yneK 0.209 32
cysT-glyW-pgsA-uvrC-uvrY,uvrC-uvrY 0.207 33
yecU 0.207 33
cysB 0.203 35
dcuC 0.202 36
pagP 0.202 36
nrdG 0.201 38