Top Promoters Bound by pspF

On this page you can access the list of promoter regions bound by pspF. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
pspA-pspB-pspC-pspD-pspE 1.000 1
pspF 1.000 2
pspH 0.976 3
pspG 0.976 4
rrlA-rrfA,rrlA 0.282 5
rrlB-rrfB,rrlB 0.282 6
avtA 0.231 7
argQ-argZ-argY-argV-serV 0.163 8
yiiF 0.151 9
sdsR,pphA-sdsR 0.151 10
yojI 0.148 11
rnk-rna,rna 0.148 12
yafF 0.135 13
ykfM 0.135 14
ybcH-nfrA,nfrA 0.134 15
yejA-yejB-yejE-yejF 0.126 16
sbp 0.122 17
rrlE,rrlE-rrfE 0.121 18
nlpC-btuD-btuE,btuE 0.112 19
yfjU 0.111 20
osmE 0.102 21
nadE,nadE-cho 0.102 22
gfcD-gfcC 0.100 23