Top Promoters Bound by relE

On this page you can access the list of promoter regions bound by relE. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
argQ 1.000 1
argQ-argZ-argY-argV-serV 1.000 1
luxS-gshA-yqaA-yqaB,yqaA-yqaB 1.000 3
mltA 0.516 4
metZ-metW-metV 0.516 4
ibpB 0.502 6
gltX 0.502 7
valU-valX-valY-lysV 0.502 7
valZ-lysY 0.501 9
lysZ 0.501 10
bssR 0.476 11
rpsU-dnaG-rpoD,rpsU,rpsU-dnaG 0.418 12
tsaD 0.418 13
rpsC-rplV-rpsS-rplB-rplW-rplD-rplC,rplV-rpsS-rplB-rplW-rplD-rplC 0.399 14
rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB-rplW-rplD-rplC-rpsJ,rpsC-rplV-rpsS-rplB-rplW-rplD-rplC-rpsJ,rplB-rplW-rplD-rplC-rpsJ,rplV-rpsS-rplB-rplW-rplD-rplC-rpsJ 0.399 14
yjeV 0.394 16
glyV-glyX-glyY 0.389 17
uxaB 0.387 18
yecA-leuZ-cysT-glyW,leuZ-cysT-glyW-3pETS-leuZ,leuZ-cysT-glyW 0.371 19
yecA 0.371 20
dinQ 0.315 21
agrA 0.315 21
tufB,tufB-secE 0.311 23
glyT-thrT-tufB-secE-nusG,glyT-thrT-tufB 0.311 24
fabD-fabG-acpP 0.290 25
tabA 0.289 26
yjgL 0.289 27
yeaD 0.280 28
infB-nusA-rimP,nusA-rimP 0.273 29
argG 0.273 30
pnp-rpsO-truB-rbfA-infB-nusA-rimP-metY,infB-nusA-rimP-metY,nusA-rimP-metY,metY 0.273 31
yfjL,yfjK-yfjL 0.251 32
rnlA,rnlA-rnlB 0.251 33
pyrE-rph,rph 0.249 34
yfaP-yfaQ-yfaT-yfaA-yfaS 0.240 35
yhdW-yhdX-yhdY-yhdZ 0.236 36
hslR-hslO 0.233 37
btuC-ihfA,ihfA 0.223 38
nadC 0.221 39
ampD-ampE 0.221 40
fhuC,fhuC-fhuD 0.220 41
malQ-malP,malP 0.206 42
yjjW 0.205 43
lpxA-lpxB,lpxA-lpxB-rnhB,lpxA 0.196 44
kptA 0.193 45
iadA-yjiG-yjiH 0.193 46
aspT 0.193 47
trpT 0.193 47
agrB 0.191 49
arsR-arsB-arsC 0.191 49
cbdA-cbdB-appA-cbdX 0.186 51
ymfJ 0.183 52
cof 0.181 53
ybaE 0.181 54
sibA 0.179 55
rpoD 0.178 56
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN 0.177 57
ypfH 0.177 58
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB 0.177 59
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL 0.177 59
xapB 0.166 61
yeiR-lpxT 0.166 62
yhcH-nanK-nanE-nanT-nanA,nanE-nanT-nanA,nanA 0.162 63
nlpC-btuD-btuE,btuE 0.160 64
slt,slt-trpR 0.158 65
ettA 0.158 66
fadM 0.157 67
gpp-rhlB,rhlB 0.155 68
rhoL-rho,rhoL-rho-wecA,rhoL-rho-wecA-wzzE,rhoL 0.155 69
lipB 0.155 70
rnb-yciW,yciW 0.149 71
hslU 0.148 72
uspC 0.148 73
ydhQ 0.145 74
valV-valW 0.145 74
yfcC 0.144 76
ybhB 0.144 77
rraA-menA-hslU-hslV,hslU-hslV 0.143 78
ychF-pth 0.142 79
ychH 0.142 79
rplF-rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP 0.141 81
rpiA,serA-rpiA 0.140 82
yciT 0.138 83
ymiD 0.138 83
yhhZ-insA-6-insB-6-insAB6 0.137 85
ybcY 0.137 86
tfaX 0.137 87
intA 0.136 88
ydcZ-mnaT 0.136 89
curA 0.136 89
rraA-menA,menA 0.132 91
dksA-sfsA-ligT,ligT 0.129 92
hrpB 0.129 93
gcvP 0.128 94
ybhR-ybhS-ybhF-ybhG-ybiH,ybhF-ybhG-ybiH 0.124 95
rhlE 0.124 95
rplL 0.122 97
wecA-wzzE-wecB-wecC-rffG-rffH-wecD-wecE-wzxE-wzyE-wecG-wecF,wecA-wzzE,wecA-wzzE-wecB 0.121 98
ybjX 0.120 99
tktB 0.120 100
rplY 0.120 101
yajI 0.119 102
nrdR-ribD-ribE-nusB-thiL,nrdR-ribD-ribE-nusB-thiL-pgpA 0.119 103
rtn 0.118 104
gpmA 0.115 105
potF-potG-potH,potF-potG,potF-potG-potH-potI 0.115 106
nc1 0.115 107
thrW 0.115 108
intF 0.115 109
ubiG 0.115 110
gyrA 0.115 111
yehF 0.115 112
pcm-umpG,nlpD-pcm-umpG 0.114 113
hspQ 0.113 114
skp-lpxD,skp-lpxD-fabZ-lpxA,skp-lpxD-fabZ-lpxA-lpxB 0.113 115
hemA,hemA-prfA-prmC 0.112 116
dauA-prsA-ispE-lolB,prsA-ispE-lolB 0.112 117
yqfA 0.111 118
rluA-rapA,rapA 0.110 119
fadJ-fadI 0.109 120
rseC-rseB-rseA,rseA 0.108 121
marC 0.108 122
ypfG 0.108 123
rpoS-nlpD 0.107 124
ytfJ 0.107 125
ytfL5p 0.107 125
ytfK 0.107 127
yjcC 0.106 128
yigE5p 0.106 129
yhhI 0.104 130
phoU 0.104 131
btuD 0.103 132
queG 0.102 133
nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC,nnr-tsaE-amiB 0.102 134
yfcI 0.102 135
ybeD-dacA-rlpA 0.102 136
uspG 0.102 137
ybdR 0.102 137
hcaR-iroK 0.101 139
lsrR,lsrK-lsrR 0.100 140
lsrA-lsrC-lsrD-lsrB-lsrF-lsrG-tam 0.100 141