Top Promoters Bound by sxy

On this page you can access the list of promoter regions bound by sxy. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
dedA-truA-usg-pdxB,truA-usg-pdxB,pdxB 1.000 1
flk 1.000 1
ybjP 0.995 3
ybjQ-amiD 0.995 3
ybaV 0.782 5
agp 0.710 6
sdhD-sdhA-sdhB 0.665 7
nuoN-nuoM 0.618 8
cptA-sdhE 0.609 9
ygfZ 0.609 9
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX 0.605 11
recC-ppdC-ygdB-ppdB-ppdA 0.583 12
cadA 0.580 13
ligB 0.580 14
gmk-rpoZ-spoT-trmH,gmk 0.580 14
smf 0.566 16
def-fmt-rsmB,def-fmt,def-fmt-rsmB-trkA 0.566 16
yfcI 0.562 18
sroH 0.559 19
dinG 0.541 20
ycaI-msbA-lpxK-ycaQ 0.525 21
yzfA 0.518 22
chpS-chpB 0.518 22
pyrD 0.518 24
rpoS-nlpD-pcm 0.515 25
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC 0.510 26
rpsA,rpsA-ihfB 0.502 27
yggR 0.491 28
yggS-yggT-yggU-rdgB-yggW 0.491 28
yjiN-mdtM 0.452 30
yjiP 0.452 30
rhsB 0.438 32
hofP-hofO-hofN-hofM 0.436 33
mrcA 0.436 33
yhgA 0.428 35
bioH 0.426 36
gntX-nfuA 0.426 36
ydiP 0.420 38
ydiQ-ydiR-ydiS-ydiT-fadK 0.420 38
eda 0.411 40
pyrG-mazG-mazF-mazE,mazG-mazF-mazE 0.411 41
prlF-yhaV 0.408 42
oxyR 0.408 43
oxyS 0.406 44
rmuC-ubiE-ubiJ-esrE,rmuC 0.405 45
yfaD-ypaA 0.395 46
panD 0.387 47
yadD 0.387 47
dinD 0.385 49
nfi-yjaG-hupA 0.383 50
rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV 0.383 51
rpsQ-rpmC-rplP-rpsC-rplV-rpsS 0.383 51
mokC-hokC 0.374 54
sokC 0.374 54
nhaA-nhaR,nhaA 0.374 54
ygfK-ssnA 0.372 56
glmM-folP 0.370 57
yafZ 0.363 58
tufA-fusA-rpsG-rpsL,fusA-rpsG-rpsL 0.345 59
lplA-ytjB 0.341 60
serB-radA-nadR,serB-radA,serB 0.341 60
fabA-ycbZ,ycbZ 0.338 62
matP 0.338 62
ygbA 0.332 64
mutS-pphB,mutS 0.332 64
mutM-rpmG-rpmB-yicR,rpmG-rpmB-yicR 0.328 66
dfp,dfp-dut-ttk 0.328 66
nfuA 0.322 68
ygdR 0.321 69
tas 0.321 69
bcsC-bcsZ-bcsB-bcsA 0.311 71
ygbF-ygbT-casE-casD-casC-casB-casA 0.310 72
yhaJ 0.302 73
yjhP 0.295 74
caiC-caiB,caiB 0.288 75
ompA-sulA,sulA 0.286 76
sxy 0.286 76
yiiE 0.281 78
ypdB-ypdC 0.280 79
pbpG 0.275 80
fmt-rsmB 0.272 81
bamA,bamA-skp,bamA-skp-lpxD-fabZ-lpxA-lpxB-rnhB-dnaE 0.271 82
pheU 0.271 83
clpB 0.271 84
ybhK 0.267 85
moaA-moaB-moaC-moaD-moaE 0.267 85
fre 0.267 87
dppF-dppD-dppC-dppB-dppA,dppA,dppC-dppB-dppA 0.263 88
ruvB-ruvA 0.261 90
yobI 0.261 90
yebB 0.261 90
yjdI-yjdJ 0.258 92
hcaT 0.256 93
hcaR-iroK 0.256 93
IS129 0.256 96
pbpC-yfhM 0.256 96
sseA 0.256 96
cfa 0.254 98
yhiD 0.250 99
ftsN-cytR,cytR 0.249 100
pheM-rplT-rpmI-infC,rplT-rpmI-infC,infC 0.248 101
ydiZ 0.246 102
yniA 0.246 102
yehE 0.242 104
hscC-rihA,rihA 0.238 105
yiiF 0.238 106
fumB 0.237 107
yhiJ 0.236 108
puuR-puuC 0.236 109
setC 0.234 110
ygbL-ygbM 0.234 111
ydcH 0.234 112
rimL 0.234 112
ybbY-glxK 0.233 114
higA-higB 0.232 115
yedK 0.231 116
pka 0.230 117
bglG,bglB-bglF-bglG 0.230 118
cpdB 0.229 119
cysQ-ytfI,cysQ 0.229 119
glgP-glgA-glgC-glgX-glgB,glgB 0.229 121
rlmG 0.228 122
ygjP 0.228 122
ndk,yfgA-rlmN-ndk 0.227 124
dusB-fis 0.226 125
rayT 0.225 126
flgK-flgL 0.225 127
gldA-fsaB-frwA 0.224 128
frwC-frwB 0.224 128
hycI 0.223 130
oppA-oppB-oppC-oppD-oppF,oppA-oppB,oppA-oppB-oppC 0.222 131
envC-yibQ 0.218 132
alaX-alaW 0.216 133
yfeC-yfeD 0.216 133
yfjP-yfjQ 0.215 135
ybiA 0.214 136
yghR-yghS 0.211 137
yghT 0.211 137
araG-araF-araH 0.211 139
ftnB 0.211 139
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplR-rplF-rpsH-rpsN-rplE-rplX-rplN 0.208 141
alpA 0.208 142
pal-ybgF-lysT-valT,pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ,pal-ybgF-lysT-valT-lysW-valZ-lysY,pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ-lysQ,pal-ybgF-lysT-valT-lysW-valZ 0.207 143
lnt-ybeX-ybeY-ybeZ,ybeX-ybeY-ybeZ,ybeY-ybeZ 0.205 144
sdiA 0.205 145
cadC 0.204 146
dctA 0.204 147
xylB-xylA 0.204 148
xylF-xylG-xylH-xylR 0.204 148
ldrD 0.203 150
yhjV 0.203 150
fadD 0.202 152
yhdV 0.202 153