Top Promoters Bound by sxy

On this page you can access the list of promoter regions bound by sxy. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
flk 1.000 1
dedA-truA-usg-pdxB,truA-usg-pdxB,pdxB 1.000 2
ybjP 0.995 3
ybjQ-amiD 0.995 3
ybaV 0.782 5
agp 0.710 6
sdhD-sdhA-sdhB 0.665 7
nuoN-nuoM 0.618 8
cptA-sdhE 0.609 9
ygfZ 0.609 9
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX 0.605 11
recC-ppdC-ygdB-ppdB-ppdA 0.583 12
cadA 0.580 13
ligB 0.580 14
gmk-rpoZ-spoT-trmH,gmk 0.580 14
smf 0.566 16
def-fmt-rsmB,def-fmt,def-fmt-rsmB-trkA 0.566 17
yfcI 0.562 18
sroH 0.559 19
dinG 0.541 20
ycaI-msbA-lpxK-ycaQ 0.525 21
yzfA 0.518 22
chpS-chpB 0.518 23
pyrD 0.518 24
rpoS-nlpD-pcm 0.515 25
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC 0.510 26
rpsA,rpsA-ihfB 0.502 27
yggR 0.491 28
yggS-yggT-yggU-rdgB-yggW 0.491 29
yjiP 0.452 30
yjiN-mdtM 0.452 31
rhsB 0.438 32
hofP-hofO-hofN-hofM 0.436 33
mrcA 0.436 33
yhgA 0.428 35
bioH 0.426 36
gntX-nfuA 0.426 37
ydiP 0.420 38
ydiQ-ydiR-ydiS-ydiT-fadK 0.420 38
eda 0.411 40
pyrG-mazG-mazF-mazE,mazG-mazF-mazE 0.411 41
prlF-yhaV 0.408 42
oxyR 0.408 43
oxyS 0.406 44
rmuC-ubiE-ubiJ-esrE,rmuC 0.405 45
yfaD-ypaA 0.395 46
panD 0.387 47
yadD 0.387 47
dinD 0.385 49
nfi-yjaG-hupA 0.383 50
rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV 0.383 51
rpsQ-rpmC-rplP-rpsC-rplV-rpsS 0.383 52
sokC 0.374 53
nhaA-nhaR,nhaA 0.374 54
mokC-hokC 0.374 55
ygfK-ssnA 0.372 56
glmM-folP 0.370 57
yafZ 0.363 58
tufA-fusA-rpsG-rpsL,fusA-rpsG-rpsL 0.345 59
lplA-ytjB 0.341 60
serB-radA-nadR,serB-radA,serB 0.341 61
matP 0.338 62
fabA-ycbZ,ycbZ 0.338 63
ygbA 0.332 64
mutS-pphB,mutS 0.332 65
mutM-rpmG-rpmB-yicR,rpmG-rpmB-yicR 0.328 66
dfp,dfp-dut-ttk 0.328 67
nfuA 0.322 68
tas 0.321 69
ygdR 0.321 70
bcsC-bcsZ-bcsB-bcsA 0.311 71
ygbF-ygbT-casE-casD-casC-casB-casA 0.310 72
yhaJ 0.302 73
yjhP 0.295 74
caiC-caiB,caiB 0.288 75
ompA-sulA,sulA 0.286 76
sxy 0.286 76
yiiE 0.281 78
ypdB-ypdC 0.280 79
pbpG 0.275 80
fmt-rsmB 0.272 81
bamA,bamA-skp,bamA-skp-lpxD-fabZ-lpxA-lpxB-rnhB-dnaE 0.271 82
pheU 0.271 83
clpB 0.271 84
ybhK 0.267 85
moaA-moaB-moaC-moaD-moaE 0.267 85
fre 0.267 87
dppF-dppD-dppC-dppB-dppA,dppA,dppC-dppB-dppA 0.263 88
ruvB-ruvA 0.261 89
yobI 0.261 90
yebB 0.261 91
yjdI-yjdJ 0.258 92
hcaR-iroK 0.256 93
hcaT 0.256 94
pbpC-yfhM 0.256 95
sseA 0.256 95
IS129 0.256 97
cfa 0.254 98
yhiD 0.250 99
ftsN-cytR,cytR 0.249 100
pheM-rplT-rpmI-infC,rplT-rpmI-infC,infC 0.248 101
ydiZ 0.246 102
yniA 0.246 103
yehE 0.242 104
hscC-rihA,rihA 0.238 105
yiiF 0.238 106
fumB 0.237 107
yhiJ 0.236 108
puuR-puuC 0.236 109
setC 0.234 110
ygbL-ygbM 0.234 111
rimL 0.234 112
ydcH 0.234 113
ybbY-glxK 0.233 114
higA-higB 0.232 115
yedK 0.231 116
pka 0.230 117
bglG,bglB-bglF-bglG 0.230 118
cpdB 0.229 119
cysQ-ytfI,cysQ 0.229 119
glgP-glgA-glgC-glgX-glgB,glgB 0.229 121
rlmG 0.228 122
ygjP 0.228 122
ndk,yfgA-rlmN-ndk 0.227 124
dusB-fis 0.226 125
rayT 0.225 126
flgK-flgL 0.225 127
gldA-fsaB-frwA 0.224 128
frwC-frwB 0.224 129
hycI 0.223 130
oppA-oppB-oppC-oppD-oppF,oppA-oppB,oppA-oppB-oppC 0.222 131
envC-yibQ 0.218 132
alaX-alaW 0.216 133
yfeC-yfeD 0.216 133
yfjP-yfjQ 0.215 135
ybiA 0.214 136
yghR-yghS 0.211 137
yghT 0.211 138
ftnB 0.211 139
araG-araF-araH 0.211 140
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplR-rplF-rpsH-rpsN-rplE-rplX-rplN 0.208 141
alpA 0.208 142
pal-ybgF-lysT-valT,pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ,pal-ybgF-lysT-valT-lysW-valZ-lysY,pal-ybgF-lysT-valT-lysW-valZ-lysY-lysZ-lysQ,pal-ybgF-lysT-valT-lysW-valZ 0.207 143
lnt-ybeX-ybeY-ybeZ,ybeX-ybeY-ybeZ,ybeY-ybeZ 0.205 144
sdiA 0.205 145
cadC 0.204 146
dctA 0.204 147
xylF-xylG-xylH-xylR 0.204 148
xylB-xylA 0.204 149
yhjV 0.203 150
ldrD 0.203 151
fadD 0.202 152
yhdV 0.202 153
endA,endA-rsmE-gshB-yqgE-yqgF 0.199 154
yggI 0.199 155
yhhW 0.199 156
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.199 157
ycgM,ycgM-ycgN 0.198 158
pliG 0.198 159
aroH 0.198 160
yjjA-dnaC-dnaT,dnaC-dnaT 0.197 161
atoD-atoA-atoE-atoB 0.195 162
lipB-ybeD-dacA,dacA 0.195 163
pyrF-yciH 0.195 164
hda-uraA-upp,uraA-upp,upp 0.194 165
purM-purN 0.194 166
topB-selD 0.194 167
tsaD 0.192 168
rpsU-dnaG-rpoD,rpsU,rpsU-dnaG 0.192 168
ykfN 0.191 170
yajD 0.190 171
ppiD-ybaV-fadM,ppiD 0.190 172
yjhE 0.189 173
yjhD 0.189 174
insO 0.189 174
ygcB 0.189 176
sokX 0.189 176
lexA-dinF-yjbJ,lexA,lexA-dinF 0.188 178
sucA-sucB,sucA-sucB-sucC-sucD 0.186 179
asnS 0.185 180
ytfP 0.185 181
rng 0.183 182
yjiK 0.183 183
intF 0.182 184
yhbW 0.181 185
ppk,ppk-ppx 0.181 186
ybfP 0.179 187
ybcH-nfrA,nfrA 0.178 188
lacA-lacY 0.178 189
sdsR,pphA-sdsR 0.178 190
yfiS 0.177 191
ogt-abgT-abgB-abgA 0.177 192
abgR 0.177 193
ybiO 0.177 194
torZ-torY 0.177 195
micL 0.177 196
ygdG 0.175 197
iclR 0.173 198
rhsJ 0.173 199
trpS-gph-rpe-dam-damX 0.173 200
pitB 0.173 201
lrhA 0.173 202
yggX,yggX-mltC-nupG,yggX-mltC 0.171 203
yibX 0.171 204
yibY 0.171 204
cedA 0.171 206
queA-tgt-yajC,queA 0.171 207
ftsP 0.170 208
ylcH 0.169 209
ybcN-ninE-ybcO-rusA-ylcG 0.169 210
fhuC,fhuC-fhuD 0.168 211
serA,serA-ibsC 0.168 212
ibsB 0.167 213
mdtA,mdtA-mdtB-mdtC-iceT-baeS-baeR 0.167 213
ileV-alaV,ileV 0.165 216
gltU 0.165 216
ileT-alaT 0.165 216
gltT 0.165 218
gltW 0.165 219
ileU 0.165 220
slyD 0.165 221
yegW 0.164 222
sokB 0.164 223
hokB 0.164 224
mokB 0.164 224
trg 0.164 226
yffM-yffN 0.162 227
btuD-btuE-btuC,btuE-btuC 0.162 228
otsA 0.161 229
mprA-emrA-emrB 0.161 230
yhjE 0.161 231
rlmA 0.160 232
glmS-glmU 0.159 233
lpxD 0.159 234
sraG 0.159 235
alaA-yfbR,alaA 0.158 236
ibsA 0.157 237
vsr-dcm-yedJ,dcm-yedJ,yedJ 0.155 238
rseX 0.155 238
yedJ-yedR 0.155 240
ymdE-ycdU 0.155 241
ycjW 0.155 242
ycjX,ycjX-ycjF-tyrR,ycjX-ycjF 0.155 243
ybeU-djlC 0.154 244
ybeT 0.154 245
mcbA 0.154 246
rlmF 0.154 246
yshB 0.154 248
tdcF-tdcE-tdcD-tdcC-tdcB-tdcG 0.151 249
purB-hflD 0.150 250
ibpA,ibpB-ibpA 0.149 251
yidQ 0.149 251
fadH 0.148 253
ydcS-ydcT-ydcU-ydcV-patD 0.148 254
truC-yqcC-csrB 0.146 255
garR 0.145 256
proL 0.145 257
mepM-znuA,znuA 0.144 258
znuC,znuC-znuB 0.144 258
ybgC-tolQ-tolR-tolA,ybgC-tolQ-tolR-tolA-tolB 0.143 260
pdxA-surA-lptD,surA-lptD,lptD 0.143 261
djlA,djlA-yabP-yabQ 0.143 261
ysaA 0.141 263
ygjV-uxaA-uxaC,uxaA-uxaC 0.139 264
exuT 0.139 265
yrdB-aroE-tsaC-yrdD-smg,tsaC-yrdD-smg,smg 0.135 266
tsr 0.135 267
blc 0.135 268
ygjJ-ygjK 0.135 269
lacY-lacZ,lacA-lacY-lacZ 0.134 270
yijF 0.134 271
cycA 0.133 272
recF-dnaN-dnaA,dnaN-dnaA 0.133 274
ysdD 0.133 274
rpmH-rnpA-yidD,rpmH-rnpA,rpmH-rnpA-yidC-mnmE-yidD,rpmH,rpmH-rnpA-yidC-yidD 0.133 274
prc-proQ 0.133 276
gmr,gmr-yciZ 0.133 277
yeiB-folE,folE 0.133 278
yeiG 0.133 278
aroP 0.132 280
ybcK 0.131 281
arcB 0.131 282
glnX-glnV-metU-glnW-glnU-leuW-metT 0.131 283
glnX-glnV-metU-glnW 0.131 284
yeeY-yeeZ,yeeZ 0.131 285
yraH 0.131 286
lafU 0.130 287
lfhA 0.130 288
yfbM 0.130 289
hofC-hofB-ppdD 0.129 290
yejG5p 0.129 291
yijO 0.129 292
cspA-insJ-insK,cspA 0.128 293
ysaE 0.128 294
csiR 0.128 295
slp-dctR 0.128 296
insH-11 0.128 297
rarD-yigI,yigF-yigG-rarD-yigI,yigI 0.126 298
pldA,pldA-recQ 0.126 298
quuQ-ydfU 0.126 300
msbA-lpxK-ycaQ-ycaR,msbA-lpxK 0.126 301
yjhV 0.126 302
gpsA-secB,cysE-gpsA-secB 0.124 303
cysE-gpsA-secB-grxC,grxC 0.124 304
metR 0.124 305
metE 0.124 305
ybhL 0.124 307
pykF 0.123 308
aceE-aceF 0.122 309
maa 0.122 310
maa-hha 0.122 311
cvrA 0.120 312
dsrA 0.120 313
yedP 0.120 314
fucR 0.120 315
mazF-mazE-relA-rlmD,mazE-relA-rlmD,rlmD 0.119 316
yjbB 0.119 317
nagK-cobB 0.119 318
ygeA-araE,araE 0.118 319
oppB-oppC-oppD-oppF 0.118 320
yncD 0.117 321
yncE 0.117 322
fabZ-lpxA-lpxB,fabZ-lpxA-lpxB-rnhB,fabZ-lpxA,fabZ 0.117 323
tpr-tyrV-tyrT 0.117 324
tpr-tyrV 0.117 325
rttR 0.117 326
galM-galK-galT-galE,galK-galT-galE,galT-galE,galE 0.117 327
ybeX-ybeY-ybeZ-miaB,ybeY-ybeZ-miaB,miaB 0.117 328
ubiF 0.117 329
mnmH,ylbG-mnmH 0.116 330
ydeM 0.116 331
sanA-yeiS 0.114 332
gcl-hyi-glxR-ybbW-allB-ybbY-glxK 0.113 333
yeaY 0.113 334
lpxM-mepM,mepM 0.111 335
dgsA,ynfK-dgsA 0.111 336
yhdT-panF-prmA-dusB,yhdT-panF-prmA 0.111 337
cspI 0.110 338
opgD-ydcH-rimL,opgD,opgD-ydcH 0.110 339
clcB 0.110 340
ssnA 0.109 341
rplS-trmD-rimM-rpsP,rimM-rpsP 0.109 342
dedD-folC 0.106 343
lgt-ptsP-rppH,ptsP-rppH 0.106 344
leuV-leuP-leuQ 0.105 345
prpB-prpC-prpD-prpE 0.105 346
prpR 0.105 347
ubiX-purF-cvpA,purF-cvpA 0.105 348
menE-menC-menB-menH-menD,menB-menH-menD 0.105 349
rhmA-rhmT-rhmD-yfaX,rhmD-yfaX 0.104 350
yceK 0.104 351
ridA 0.104 352
rrlB-rrfB,rrlB 0.104 353
ycjD 0.104 354
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF 0.104 355
frvR-frvX-frvB-frvA 0.103 356
yahL 0.103 357
yhaO-yhaM 0.103 358
rdgB-yggW 0.102 359
btuC-ihfA,ihfA 0.102 360
allR,allR-gcl-hyi 0.101 361
yhjX 0.101 362
yadW 0.100 363
erpA 0.100 363
glk 0.100 365
yfeO 0.100 365
chbG-chbF-chbR-chbA-chbC-chbB,chbC-chbB 0.100 367