Top Promoters Bound by treR

On this page you can access the list of promoter regions bound by treR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
cyaA 1.000 1
ykfI-yafW-ykfG-ykfH 0.875 2
treC-treB,treB 0.573 3
ygiV 0.462 4
ybdN 0.412 5
bsmA 0.399 6
yjfP 0.399 6
yidC-mnmE,yidC 0.380 8
ftsH-rlmE,rlmE 0.375 9
yhbY 0.375 9
ydjN 0.370 11
sfsB 0.366 12
yneK 0.356 13
msyB 0.346 14
yibS 0.342 15
rlmE-greA,greA 0.333 16
dacB 0.333 16
gadC 0.328 18
yaiY 0.326 19
yaiZ 0.326 19
maa 0.319 21
mreD-mreC 0.301 22
ybiE 0.295 23
ppk,ppk-ppx 0.293 24
dksA,pcnB-gluQ-dksA,gluQ-dksA 0.287 25
ykgM-ykgO 0.282 26
ycgX 0.279 27
insH-8 0.272 29
yejO 0.272 29
narP 0.272 29
gntK-gntR-gntU,gntK-gntR,gntR 0.259 31
insL-3 0.258 32
allS 0.258 33
allA 0.258 33
ibaG-mlaB-mlaC-mlaD-mlaE 0.256 35
recB 0.254 36
yqfA 0.252 37
bglA 0.252 37
allR,allR-gcl-hyi 0.246 39
yieK-yieL-bglH 0.246 40
yedK 0.244 41
tyrR,tyrR-ycjG 0.241 42
ileV-alaV,ileV 0.231 45
gltW 0.231 45
ileU 0.231 45
gltU 0.231 45
ileT-alaT 0.231 45
gltT 0.231 45
aceE-aceF 0.229 49
rhsE-ydcD 0.222 50
ybjI-ybjJ 0.221 51
ybjK 0.221 51
nudL-sdaA 0.221 53
mngA-mngB 0.219 54
mngR 0.218 55
ysgD 0.218 56
yfeY-yfeZ-ypeA,yfeZ-ypeA,yfeX-yfeY-yfeZ-ypeA 0.216 57
yicH 0.211 58
hfq-hflX-hflK,hfq,hfq-hflX-hflK-hflC,hfq-hflX 0.209 59
pspG 0.209 60
rraA 0.209 61
kdgT 0.205 62
ompL 0.203 63
sugE 0.203 64
parE-yqiA-cpdA 0.201 65
slyD 0.201 66
asnS 0.201 67