Top Promoters Bound by tyrR

On this page you can access the list of promoter regions bound by tyrR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
tyrA-aroF 1.000 1
yfiL 1.000 2
tyrB 0.389 3
nfrA-nfrB,nfrB 0.336 4
hslJ-ldhA,ldhA 0.336 5
ydbH-ynbE-ydbL 0.336 6
tfaX 0.331 7
glyV-glyX-glyY 0.329 8
psd-rsgA,rsgA 0.329 9
lexA-dinF-yjbJ,lexA,lexA-dinF 0.307 10
nanR 0.295 11
dcuD 0.295 11
rsmH-ftsL-ftsI-murE-murF-mraY-murD-ftsW-murG-murC-ddlB-ftsQ-ftsA-ftsZ-lpxC 0.288 13
yjiT 0.280 14
tyrR,tyrR-ycjG 0.277 15
yeeN 0.273 16
pdxY 0.272 17
pagP 0.268 18
dcuC 0.268 19
ybiJ 0.259 20
aroM 0.244 21
rem-hokD-relE-relB,hokD-relE-relB,relE-relB 0.233 22
ydfV 0.233 23
yecH 0.231 24
tyrP 0.231 24
rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB,rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB 0.223 26
yfbP 0.219 27
glpR-glpG-glpE 0.218 28
glpD 0.218 29
glpR-glpG 0.218 30
yjaH 0.209 31
yaiX 0.209 32
fhuE 0.206 33
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP 0.206 33
hsrA-yieP 0.197 35
rrsC,rrsC-gltU,rrsC-gltU-rrlC-rrfC 0.197 36
yhbP-yhbS-yhbT,yhbS-yhbT 0.194 37
yhbU-yhbV-yhbW,yhbU-yhbV 0.194 37
yqeB 0.191 39
yjiA-yjiX-yjiY,yjiX-yjiY,yjiY 0.189 40
tsr 0.189 41
ysdE 0.187 42
emrD 0.187 43
ppa 0.187 44
ytfQ-ytfT-yjfF-ytfR 0.187 45
insA-1-rpsT,rpsT 0.187 47
yaaY 0.187 47
ribF-ileS,ribF-ileS-lspA-fkpB-ispH 0.187 47
aroP 0.186 49
pdhR,pdhR-aceE-aceF-lpd 0.186 50
ycjM-ycjN-ycjO-ycjP-ycjQ-ycjR-ycjS-ycjT-ycjU-ycjV-ompG-ymjB 0.182 51
eda 0.176 52
pgk-epd,fbaA-pgk-epd 0.175 53
ycjG 0.175 54
tpx 0.175 55
pbl 0.172 56
ygeI 0.172 57
pinQ 0.172 58
pinR 0.172 59
ihfA-pheT-pheS-pheM,pheM 0.170 60
cbrA 0.170 61
gcvB 0.169 62
rlmM-ygdD-gcvA,gcvA,ygdD-gcvA 0.169 63
ybdN 0.169 64
radA-nadR 0.166 65
ychF-pth 0.161 66
ychH 0.161 66
flxA 0.160 68
yicG 0.156 69
proP,proP-pmrR 0.153 70
aroL-yaiA-aroM,aroL-yaiA 0.153 71
yjgA 0.151 72
pmbA 0.151 73
ribA 0.150 74
frlA-frlB-frlD-yhfR-frlC 0.150 75
clpX-lon,clpX 0.149 76
yliI 0.147 77
racC 0.146 78
yhfL 0.146 79
nikA-nikB-nikC-nikD,nikA-nikB-nikC-nikD-nikE-nikR 0.143 80
glyU 0.142 81
thrL,thrL-thrA-thrB-thrC,thrL-thrA-thrB 0.138 82
ettA 0.138 83
slt,slt-trpR 0.138 84
fliL-fliM-fliN-fliO-fliP-fliQ-fliR 0.136 85
yahC 0.136 86
yniC 0.136 87
yniB 0.136 88
yjaB 0.135 89
metA 0.135 90
setB 0.134 91
fruA-fruK-fruB 0.134 92
gnd 0.132 93
dgkA,dgkA-lexA 0.131 94
plsB 0.131 95
rluB 0.131 96
adiY 0.131 97
ydjO 0.131 98
nmpC 0.130 99
essD-rrrD-rzpD 0.130 100
pepQ-yigZ,pepQ-yigZ-trkH,pepQ-yigZ-trkH-hemG 0.129 101
fadA-fadB 0.129 102
cfa 0.128 103
rplN-rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB-rplW,rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB-rplW 0.127 104
dicA 0.126 105
intK-ydfX-dicC 0.126 106
ydgA 0.126 107
yoaL 0.125 108
manX-manY-manZ,manX-manY-manZ-yobD 0.125 109
yoaE 0.125 110
yiiG 0.124 111
yehL-yehM-yehP-yehQ 0.123 112
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB 0.121 113
intF 0.120 114
yahL 0.120 115
ybjL-rybB,ybjL 0.118 116
ybjM 0.118 116
gadW 0.117 118
gadY 0.117 118
pta 0.117 120
yrdB-aroE-tsaC-yrdD 0.116 121
yrdB-aroE-tsaC-yrdD-smg,tsaC-yrdD-smg,smg 0.116 122
cpxA-cpxR 0.116 123
cpxP 0.116 124
yaiO 0.115 125
cysM-cysA-cysW-cysU-cysP,cysA-cysW-cysU-cysP 0.115 126
ygbL-ygbM 0.115 127
adeP 0.114 128
yieH 0.114 129
dinG 0.114 130
gltX 0.113 131
cmk-rpsA,cmk,cmk-rpsA-ihfB 0.113 132
eaeH-insE-1-insF-1-insEF1 0.111 133
ykgP 0.111 134
mcrA 0.111 135
dgsA,ynfK-dgsA 0.109 136
aldA 0.109 137
glgS 0.109 138
yqiJ-yqiK 0.109 138
rrfG 0.108 141
rrfC 0.108 141
aspT 0.108 141
trpT 0.108 141
aspU 0.108 144
yjaA 0.108 145
ubiC-ubiA 0.108 146
truC-yqcC-csrB 0.108 147
yqcA-truC-yqcC 0.108 148
ymgI 0.107 149
ymgD-ymgG 0.107 150
ymgJ 0.107 150
ymgH 0.107 152
putA 0.107 153
putP 0.107 153
ompG 0.107 155
mltD 0.106 156
yafC 0.106 157
yafD,yafD-yafE 0.106 157
sra 0.106 159
osmC 0.106 160
sra-bdm 0.106 161
yshB 0.106 162
thrU-tyrU-glyT-thrT-tufB-secE-nusG-rplK,thrU-tyrU-glyT-thrT-tufB-secE-nusG,thrU-tyrU-glyT-thrT-tufB 0.106 163
glyT-thrT-tufB-secE-nusG,glyT-thrT-tufB 0.106 164
coaA 0.106 165
pheU 0.105 166
nanS-nanM-nanC,nanM-nanC,nanC 0.105 167
ansB 0.105 168
dinI 0.105 169
ydcL-insQ,ydcL 0.104 170
proV-proW-proX 0.104 171
rplX-rplN-rpsQ-rpmC 0.102 172
yqhD-dkgA 0.102 173
yqhC 0.102 174
rhsO-ybfC 0.102 175
yhjH 0.101 176
kdgK 0.101 176