Top Promoters Bound by ulaR

On this page you can access the list of promoter regions bound by ulaR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
ulaG 1.000 1
ulaA-ulaB-ulaC-ulaD-ulaE,ulaA-ulaB-ulaC-ulaD-ulaE-ulaF 1.000 1
tdcF-tdcE-tdcD-tdcC-tdcB-tdcA-tdcG 0.806 4
tdcR 0.806 4
yhaB-yhaC 0.806 4
gcl-hyi-glxR-ybbW-allB-ybbY-glxK 0.801 6
yecA 0.673 7
trkG 0.638 8
ybiJ-ybiI-ybiX-ybiL,ybiI-ybiX-ybiL,ybiL 0.587 9
satP 0.573 10
mbiA 0.573 10
ulaR 0.569 12
waaH-tdh-kbl,tdh-kbl 0.531 13
ugpQ 0.528 14
lolA-rarA 0.500 15
secE-nusG,secE-nusG-rplK-rplA 0.488 16
gpp 0.454 17
ldrC 0.450 18
caiF 0.449 19
yjhC 0.448 20
ybdH 0.436 21
ais 0.423 22
arnB-arnC-arnA-arnD-arnT-arnF-arnE 0.423 22
ycaL 0.403 24
insB-5-insA-5-insAB5 0.402 25
uspC 0.402 25
tyrT-purU,purU 0.397 27
rssA,rssA-rssB,rssA-rssB-galU 0.397 27
yihS-yihT-yihU 0.393 29
yihV-yihW 0.393 29
uvrA 0.392 31
ssb 0.392 31
ymdB,ymdB-clsC 0.385 33
yhcG 0.385 34
fabD-fabG-acpP 0.381 35
yhiL 0.376 36
yhiM 0.376 36
cysT-glyW-pgsA-uvrC-uvrY,uvrC-uvrY 0.375 39
yecU 0.375 39
yecF 0.375 39
yaeI 0.375 41
paoD-paoC-paoB-paoA 0.370 42
yagU 0.370 42
rhsC-ybfB 0.368 44
ynfN 0.361 46
ynfR 0.361 46
ynfQ 0.361 46
argD 0.361 48
ruvB-ruvA 0.348 50
yobI 0.348 50
yebB 0.348 50
smtA-mukF-mukE-mukB,smtA-mukF-mukE 0.340 52
lrhA 0.328 53
ynaM 0.321 54
rpoH 0.309 55
yqcA-truC-yqcC 0.304 56
infB-nusA 0.300 57
infB-nusA-rimP,nusA-rimP 0.300 57
yigF-yigG 0.295 59
msrA 0.293 60
tamA-tamB-ytfP,tamA 0.293 60
recF-dnaN 0.290 62
ybdK 0.285 64
sokE 0.285 64
hokE 0.285 64
tdk 0.280 66
intE-xisE-ymfH 0.279 67
rpoH-ftsX-ftsE 0.278 68
cadC 0.277 69
ydjE 0.273 70
pheM-rplT-rpmI-infC,rplT-rpmI-infC,infC 0.267 71
yhbW 0.267 72
bax 0.263 74
baxL 0.263 74
malS 0.263 74
ybfL 0.261 76
cadA 0.257 77
dsrA 0.257 78
yedP 0.257 78
gltP 0.255 80
ygcW 0.253 81
yqcE-ygcE 0.253 81
borD 0.251 83
ompN-pfo,pfo 0.251 84
ydbJ 0.251 84
rclC-rclB 0.250 86
ydgI,ydgI-folM 0.248 87
yihW 0.247 88
pncC,recX-recA-pncC,recA-pncC 0.245 89
sdhD-sdhA-sdhB 0.237 90
yfjP-yfjQ 0.236 91
ymgF 0.235 92
yjcE 0.235 93
dsdC 0.234 94
dsdX-dsdA 0.234 94
yqjF 0.233 96
apt,apt-dnaX-ybaB 0.231 97
dut-ttk 0.229 98
abrB 0.228 99
ybdN 0.228 100
yadN 0.227 101
alaC 0.227 102
ypdA-ypdB-ypdC 0.227 102
ycgE 0.227 104
fucO-fucA 0.227 105
fucP-fucI-fucK-fucU-fucR 0.227 105
yfbN 0.225 107
yfbO 0.225 107
yaeH 0.225 109
ybcL-ybcM 0.225 110
csrA,argZ-argY-argV-serV-csrA 0.224 111
elaD 0.223 112
gndA 0.222 113
gnd 0.222 113
menE-menC-menB 0.222 115
yqeF 0.222 116
yqeG 0.222 116
yjhG-yjhH-yjhI 0.221 118
rnk 0.216 119
yeaY-tsaB-yoaA,yoaA 0.215 120
ykiA 0.214 121
ykiD 0.214 121
rybA-mntS 0.214 123
mntR,mntR-ybiR 0.214 123
ybfQ 0.214 125
gntP 0.214 126
uxuA-uxuB 0.214 126
yqfH 0.213 128
idi 0.213 128
argE 0.213 130
argC-argB-argH 0.213 130
ynaE 0.212 132
ycgL 0.208 133
yfbP 0.208 134
typA5p 0.207 135
bcsC-bcsZ-bcsB-bcsA 0.206 136
yibA 0.205 137
zwf 0.202 138
yebK-pykA,yebK 0.202 138
inaA-glpQ-glpT,glpQ-glpT 0.201 140
glpA-glpB,glpA-glpB-glpC 0.201 140
cspI 0.200 142