Top Promoters Bound by ulaR

On this page you can access the list of promoter regions bound by ulaR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs)	Scores	Ranks

ulaA-ulaB-ulaC-ulaD-ulaE,ulaA-ulaB-ulaC-ulaD-ulaE-ulaF	1.000	1
ulaG	1.000	2
yhaB-yhaC	0.806	3
tdcF-tdcE-tdcD-tdcC-tdcB-tdcA-tdcG	0.806	4
tdcR	0.806	4
gcl-hyi-glxR-ybbW-allB-ybbY-glxK	0.801	6
yecA	0.673	7
trkG	0.638	8
ybiJ-ybiI-ybiX-ybiL,ybiI-ybiX-ybiL,ybiL	0.587	9
mbiA	0.573	10
satP	0.573	11
ulaR	0.569	12
waaH-tdh-kbl,tdh-kbl	0.531	13
ugpQ	0.528	14
lolA-rarA	0.500	15
secE-nusG,secE-nusG-rplK-rplA	0.488	16
gpp	0.454	17
ldrC	0.450	18
caiF	0.449	19
yjhC	0.448	20
ybdH	0.436	21
ais	0.423	22
arnB-arnC-arnA-arnD-arnT-arnF-arnE	0.423	23
ycaL	0.403	24
insB-5-insA-5-insAB5	0.402	25
uspC	0.402	26
rssA,rssA-rssB,rssA-rssB-galU	0.397	27
tyrT-purU,purU	0.397	28
yihS-yihT-yihU	0.393	29
yihV-yihW	0.393	29
uvrA	0.392	31
ssb	0.392	32
ymdB,ymdB-clsC	0.385	33
yhcG	0.385	34
fabD-fabG-acpP	0.381	35
yhiM	0.376	36
yhiL	0.376	37
yecF	0.375	38
cysT-glyW-pgsA-uvrC-uvrY,uvrC-uvrY	0.375	39
yecU	0.375	39
yaeI	0.375	41
paoD-paoC-paoB-paoA	0.370	42
yagU	0.370	42
rhsC-ybfB	0.368	44
ynfN	0.361	45
ynfR	0.361	46
ynfQ	0.361	46
argD	0.361	48
yobI	0.348	49
ruvB-ruvA	0.348	50
yebB	0.348	50
smtA-mukF-mukE-mukB,smtA-mukF-mukE	0.340	52
lrhA	0.328	53
ynaM	0.321	54
rpoH	0.309	55
yqcA-truC-yqcC	0.304	56
infB-nusA	0.300	57
infB-nusA-rimP,nusA-rimP	0.300	58
yigF-yigG	0.295	59
msrA	0.293	60
tamA-tamB-ytfP,tamA	0.293	61
recF-dnaN	0.290	62
sokE	0.285	63
hokE	0.285	64
ybdK	0.285	65
tdk	0.280	66
intE-xisE-ymfH	0.279	67
rpoH-ftsX-ftsE	0.278	68
cadC	0.277	69
ydjE	0.273	70
pheM-rplT-rpmI-infC,rplT-rpmI-infC,infC	0.267	71
yhbW	0.267	72
baxL	0.263	73
malS	0.263	73
bax	0.263	75
ybfL	0.261	76
cadA	0.257	77
dsrA	0.257	78
yedP	0.257	78
gltP	0.255	80
ygcW	0.253	81
yqcE-ygcE	0.253	81
borD	0.251	83
ompN-pfo,pfo	0.251	84
ydbJ	0.251	85
rclC-rclB	0.250	86
ydgI,ydgI-folM	0.248	87
yihW	0.247	88
pncC,recX-recA-pncC,recA-pncC	0.245	89
sdhD-sdhA-sdhB	0.237	90
yfjP-yfjQ	0.236	91
ymgF	0.235	92
yjcE	0.235	93
dsdC	0.234	94
dsdX-dsdA	0.234	95
yqjF	0.233	96
apt,apt-dnaX-ybaB	0.231	97
dut-ttk	0.229	98
abrB	0.228	99
ybdN	0.228	100
yadN	0.227	101
alaC	0.227	102
ypdA-ypdB-ypdC	0.227	102
ycgE	0.227	104
fucO-fucA	0.227	105
fucP-fucI-fucK-fucU-fucR	0.227	106
yfbN	0.225	107
yfbO	0.225	108
yaeH	0.225	109
ybcL-ybcM	0.225	110
csrA,argZ-argY-argV-serV-csrA	0.224	111
elaD	0.223	112
gndA	0.222	113
gnd	0.222	113
menE-menC-menB	0.222	115
yqeF	0.222	116
yqeG	0.222	117
yjhG-yjhH-yjhI	0.221	118
rnk	0.216	119
yeaY-tsaB-yoaA,yoaA	0.215	120
ykiD	0.214	121
ykiA	0.214	122
rybA-mntS	0.214	123
mntR,mntR-ybiR	0.214	124
ybfQ	0.214	125
gntP	0.214	126
uxuA-uxuB	0.214	126
yqfH	0.213	128
idi	0.213	128
argE	0.213	130
argC-argB-argH	0.213	130
ynaE	0.212	132
ycgL	0.208	133
yfbP	0.208	134
typA5p	0.207	135
bcsC-bcsZ-bcsB-bcsA	0.206	136
yibA	0.205	137
yebK-pykA,yebK	0.202	138
zwf	0.202	139
inaA-glpQ-glpT,glpQ-glpT	0.201	140
glpA-glpB,glpA-glpB-glpC	0.201	140
cspI	0.200	142
ycjD	0.200	143
ompW	0.197	144
yciA-yciB-yciC,yciB-yciC	0.197	145
pheV	0.197	146
ybcK	0.195	147
mdh	0.194	148
argR	0.194	149
ydjG-ydjH-ydjI-ydjJ-ydjK-ydjL	0.193	150
yoaC	0.193	151
yebY-yebZ-yobA	0.192	152
yobB-exoX	0.192	152
ibaG-mlaB-mlaC-mlaD-mlaE-mlaF,mlaB-mlaC-mlaD-mlaE-mlaF,mlaC-mlaD-mlaE-mlaF	0.191	154
yrbG-kdsD-kdsC-lptC-lptA-lptB,yrbG-kdsD,yrbG-kdsD-kdsC	0.191	155
purA-nsrR,purA	0.191	156
ybhH	0.188	157
ybhD	0.188	158
yacH	0.188	159
acnB,acnB-yacL	0.188	160
mutH	0.187	161
ygdT	0.187	162
recJ-dsbC-xerD,xerD,dsbC-xerD	0.185	163
fldB	0.185	164
alsK	0.185	165
yqiD	0.185	166
tyrR,tyrR-ycjG	0.185	167
ylcI	0.185	168
nohD	0.185	168
ydfO-ynfO	0.185	170
tfaQ-stfQ-nohQ	0.185	171
yadX	0.183	172
clcA-erpA,clcA	0.183	173
hemL	0.183	174
ykgP	0.182	175
pliG	0.181	176
ada-apbE-ompC,ompC	0.181	177
micF	0.181	178
nc6	0.179	179
yjiK-yjiL-yjiM-ytiA,yjiL-yjiM	0.179	180
insH-2-nmpC,insH-2	0.179	181
yhhW	0.176	182
appY	0.176	183
rspB-rspA	0.176	184
cfa	0.175	185
moaB-moaC-moaD-moaE	0.174	186
ydfK-ynfT	0.174	187
nupG	0.174	188
ynbA-ynbB-ynbC-ynbD	0.172	189
zntA,zntA-yhhQ	0.169	190
atpG-atpA-atpH-atpF,atpA-atpH-atpF	0.169	191
torC-torA-torD	0.169	192
torR	0.169	193
yddJ-yddK-yddL	0.168	194
ycgM,ycgM-ycgN	0.167	195
recA-pncC-mltB,mltB	0.167	196
srlA-srlE-srlB-srlD-gutM-srlR-srlQ,srlA-srlE-srlB-srlD-gutM-srlR	0.167	197
znuC,znuC-znuB	0.166	198
mepM-znuA,znuA	0.166	199
fecA-fecR-fecI,fecR-fecI	0.165	200
insA-7	0.165	200
ykiE	0.165	202
pflA	0.164	203
mntP	0.163	204
yqhD-dkgA	0.163	205
yqhC	0.163	206
pgk-epd,fbaA-pgk-epd	0.162	207
dps	0.162	208
ariR	0.161	209
ymgA-ariR	0.161	210
yjhE	0.160	211
ythA	0.160	212
ygeI	0.160	213
pbl	0.160	214
yeaG-yeaH	0.158	215
mipA	0.158	216
ybcH	0.157	217
rraB	0.156	218
elfD-elfC-elfG-ycbU-ycbV-ycbF	0.156	219
yhhI	0.155	220
xylR	0.155	221
nc4	0.154	222
alaA-yfbR,alaA	0.154	223
ivy	0.154	224
yafV	0.154	225
amiA-hemF	0.154	226
yfeY-yfeZ-ypeA,yfeZ-ypeA,yfeX-yfeY-yfeZ-ypeA	0.154	227
ykgS	0.154	228
hslR-hslO	0.153	229
yjiT	0.153	230
dcuC	0.153	231
pagP	0.153	232
fur-fldA-uof,fldA	0.153	233
yhaH	0.151	234
intA	0.150	235
yafZ-ykfA,ykfA	0.149	236
dapD-glnD,glnD	0.148	237
micL	0.147	238
artJ	0.147	239
sdiA	0.145	240
sdsN	0.145	240
yqeK	0.145	242
ygeF	0.145	242
ymdF	0.142	244
yccJ-wrbA	0.142	245
leuO	0.141	246
leuD-leuC-leuB-leuA-leuL,leuL	0.141	247
dsbD-cutA-dcuA,cutA-dcuA,dcuA	0.140	248
metF	0.139	249
tnaB	0.138	250
gltS	0.138	251
xanP-yicH,xanP	0.138	251
ydhB	0.138	253
ydhC	0.138	254
ybjI-ybjJ	0.138	255
lit	0.136	256
oxc	0.135	257
ybeF	0.135	258
mdlA-mdlB	0.134	259
yjgR	0.133	260
yaaA	0.133	261
setC	0.133	262
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL	0.133	263
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB	0.133	264
ynfB-speG	0.132	265
ansA-pncA	0.132	266
evgL	0.132	267
emrY-emrK	0.132	268
evgA-evgS,evgA	0.132	268
yicL	0.131	270
truD,pcm-umpG-truD	0.131	271
yibT	0.131	272
yibL	0.131	272
hisP-hisM-hisQ-hisJ	0.131	274
ykgE-ykgF-ykgG	0.130	275
mcrA	0.130	276
stpA	0.129	277
yahA	0.129	278
yiaB	0.129	279
ogt-abgT-abgB-abgA	0.129	280
abgR	0.129	280
acrE-acrF	0.129	282
envR	0.129	283
malQ-malP,malP	0.128	284
malT	0.128	285
ralA	0.128	286
clcB	0.127	287
ydcC	0.126	288
nrdR-ribD-ribE-nusB-thiL,nrdR-ribD-ribE-nusB-thiL-pgpA	0.126	289
yajI	0.126	290
speE,speD-speE	0.125	291
ynfA	0.125	292
raiA,raiA-pheL	0.125	293
dinD	0.124	294
yjbL-yjbM	0.124	295
zur	0.124	296
yneK	0.123	297
nanS-nanM-nanC,nanM-nanC,nanC	0.123	298
dacD,sbmC-dacD	0.123	299
sbcB	0.123	299
ampG-yajG,yajG	0.123	301
bolA	0.123	301
fhuE	0.122	303
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP	0.122	304
ybhI	0.122	305
htpX	0.122	306
envC-yibQ	0.121	307
racR	0.121	308
hspQ	0.120	309
yidF-yidG-yidH	0.120	310
yjcO	0.120	311
hdhA,uidR-hdhA	0.120	312
ydcX	0.119	313
ydcY	0.119	314
yncL	0.119	315
ytiC	0.119	316
iraD-idlP	0.119	317
yjiC	0.119	318
iraD-ytiD-idlP	0.119	318
pnp-rpsO-truB-rbfA-infB-nusA-rimP-metY,infB-nusA-rimP-metY,nusA-rimP-metY,metY	0.119	320
argG	0.119	320
csgB-csgA-csgC	0.119	322
csgA	0.119	323
yddG	0.119	324
fdnG-fdnH-fdnI,fdnG	0.119	325
nlpC,ydiV-nlpC	0.118	326
aaeR	0.118	327
aaeB-aaeA-aaeX	0.118	328
yoeF	0.118	329
dtd-yiiD	0.117	330
frc	0.114	331
yicI-yicJ	0.114	332
selC	0.114	332
rsmI	0.113	334
lpoA-yraN-diaA,lpoA,lpoA-yraN-diaA-yraP	0.113	334
ldrA	0.112	336
rdlA	0.112	337
ruvC-yebC	0.112	338
ycdX-ycdY,ycdX-ycdY-ycdZ	0.112	339
murJ	0.112	340
purT	0.111	341
yebF-yebG,yebG	0.111	342
yhcC	0.111	343
yrhB	0.111	344
rhtA	0.110	346
ompX-yliM	0.110	346
ompX	0.110	346
htrE-yadV	0.109	348
ampD-ampE	0.108	349
yhcH-nanK-nanE-nanT-nanA,nanE-nanT-nanA,nanA	0.108	350
mltA	0.107	351
cspA-insJ-insK,cspA	0.105	352
ysaE	0.105	353
pdxH-mliC-anmK,anmK,mliC-anmK	0.105	354
slyB	0.105	354
pflD-pflC	0.105	356
yddM	0.104	357
yceI-yceJ	0.104	358
yicN	0.104	359
yraH	0.103	360
yhdU	0.103	361
yqjA-mzrA,yqjA-mzrA-yqjC-yqjD	0.103	362
yqiM	0.103	363
yjeJ	0.103	364
yfjX-yfjY-yfjZ-ypjF-ypjJ	0.102	365
ypjI	0.102	366
dmsA-dmsB-dmsC,dmsA-dmsB	0.101	367
yibG	0.101	368
hisS-ispG-yfgA,yfgA	0.101	369
carA,carA-carB	0.101	370
astE-astB-astD-astA-astC	0.100	371
xthA	0.100	371