Top Promoters Bound by yciT

On this page you can access the list of promoter regions bound by yciT. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
ybiW-ybiY 1.000 1
fsaA 1.000 2
ybiU 0.927 3
dmsA-dmsB-dmsC,dmsA-dmsB 0.307 4
ybiV 0.291 5
mtfA-asnT,mtfA 0.238 6
zwf 0.212 7
yebK-pykA,yebK 0.212 7
ybhR-ybhS-ybhF-ybhG-ybiH,ybhF-ybhG-ybiH 0.189 9
rhlE 0.189 10
yqeH 0.188 11
metG 0.162 12
yhaK-yhaL 0.155 13
yhaJ 0.155 14
intF 0.149 15
yfdK-yfdL-yfdM-yfdN-oweS 0.143 16
yfdP-yfdQ 0.143 17
cybB,cybB-ydcA-sokB 0.139 18
gapC 0.139 19
ybiO 0.136 20
ynfN 0.135 21
ynfR 0.135 21
ynfQ 0.135 23
tpr-tyrV 0.132 24
tpr-tyrV-tyrT 0.132 25
yggM 0.132 26
rraA-menA-hslU-hslV,hslU-hslV 0.131 27
rlmA 0.130 28
gltW-rrsG,rrsG,rrfG-rrlG-gltW-rrsG 0.130 29
gpt-frsA,gpt 0.130 30
pepD 0.130 31
yhdW-yhdX-yhdY-yhdZ 0.128 32
yihX-yihY-dtd-yiiD 0.124 33
yijE 0.123 34
kduD 0.120 35
yehE-mrp,mrp 0.117 36
miaA-hfq-hflX,miaA-hfq-hflX-hflK-hflC 0.115 37
yqgH 0.115 38
speC 0.115 39
yqgA-pheV,yqgA 0.115 39
inaA 0.113 41
yfaH 0.113 41
bsmA 0.112 43
yjfP 0.112 44
rttR 0.112 45
fecB,fecC-fecB 0.110 46
lpxP 0.109 47
glpK 0.108 48
yhgE 0.107 49
pck 0.107 49
yjjY 0.107 51
arcA 0.107 52
kdpE 0.105 53
ylbI 0.104 54
dusB-fis 0.104 55
ompA 0.103 56
ygbF-ygbT-casE-casD 0.101 57