Top Promoters Bound by ydjF

On this page you can access the list of promoter regions bound by ydjF. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
ydjF 1.000 1
glpR-glpG 0.347 2
glpR-glpG-glpE 0.347 3
glpD 0.347 4
cysB 0.306 5
uspE-fnr,fnr 0.269 6
kdgR 0.263 7
yebQ 0.263 7
ubiX-purF-cvpA,purF-cvpA 0.228 9
rseP 0.185 10
yfcV 0.183 11
trkA 0.174 12
ydiF-ydiO 0.171 13
matA 0.158 14
phoU-pstB-pstA-pstC-pstS,pstB-pstA-pstC-pstS,pstA-pstC-pstS,pstS 0.149 15
pqiA-pqiB-pqiC 0.148 16
rplN-rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB-rplW,rpsQ-rpmC-rplP-rpsC-rplV-rpsS-rplB-rplW 0.143 17
fic-yhfG-ppiA,yhfG-ppiA,ppiA 0.138 18
tsgA 0.138 18
yjaZ 0.135 20
rplY 0.133 21
yjeJ 0.133 22
yneG-glsB-sad,sad 0.132 23
yneJ 0.132 24
nadA-pnuC 0.131 25
gnsB 0.130 26
ypfM 0.129 27
yffB-dapE-ypfN 0.129 28
maa-hha 0.121 29
hha-tomB 0.121 30
sstT 0.120 31
rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV,rplE-rplX-rplN-rpsQ-rpmC-rplP-rpsC-rplV 0.120 32
rpsQ-rpmC-rplP-rpsC-rplV-rpsS 0.120 33
dsbB-nhaB,nhaB 0.119 34
ubiI-ubiH-pepP-ygfB,ubiH-pepP-ygfB 0.116 35
zapA-ssrS-fau,zapA 0.116 36
yqgD 0.115 37
metK 0.115 37
speB-speA-yqgB,yqgB 0.115 39
yqgG 0.115 39
yebO-mgrB,mgrB 0.113 41
yobH 0.113 41
hspQ-rlmI,rlmI 0.112 43
yccX 0.112 44
lipB-ybeD,ybeD 0.111 45
blc 0.110 46
zntR-yhdN-rplQ-rpoA-rpsD-rpsK-rpsM,yhdN-rplQ-rpoA-rpsD-rpsK-rpsM,rplQ-rpoA-rpsD-rpsK-rpsM 0.109 47
gadW 0.108 48
gadY 0.108 49
insQ 0.108 50
fadD 0.108 51
yfiP,yfiP-pka 0.107 52
sthA 0.106 53
fabR-yijD 0.106 53
elyC 0.104 55
smtA-mukF-mukE-mukB,smtA-mukF-mukE 0.104 56
yrfG-hslR,yrfG-hslR-hslO 0.102 57
yjgX 0.101 58
yjgZ 0.101 59
yrdB-aroE-tsaC-yrdD 0.101 60
yrdB-aroE-tsaC-yrdD-smg,tsaC-yrdD-smg,smg 0.101 61