Top Promoters Bound by yfeC

On this page you can access the list of promoter regions bound by yfeC. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
aroM 1.000 1
yaiC 0.954 2
chaC 0.817 3
menF-elaB-elaA,elaB-elaA,elaA 0.428 4
ybdN 0.410 5
ttcC 0.330 6
rseC-rseB-rseA,rseA 0.308 7
rem 0.301 8
mntP 0.272 9
yobI 0.262 10
ruvB-ruvA 0.262 11
yebB 0.262 11
inaA-glpQ-glpT,glpQ-glpT 0.245 13
glpA-glpB,glpA-glpB-glpC 0.245 13
trpS-gph-rpe,gph-rpe 0.234 15
plaP 0.225 16
yjjA-dnaC-dnaT,dnaC-dnaT 0.218 17
yjjA-dnaC-dnaT-yjjB,dnaC-dnaT-yjjB 0.218 18
plaP-yoeI 0.215 19
yjeT 0.212 20
purA-nsrR,purA 0.212 21
ydeA 0.212 22
gltS 0.207 23
xanP-yicH,xanP 0.207 23
yojO 0.207 25
iraP-phoA,iraP 0.198 26
phoA-psiF 0.198 27
ybcL-ybcM 0.186 28
yqeH 0.184 29
ygeA 0.183 30
yidE 0.180 31
yghX 0.171 32
gpr 0.171 32
yciE-yciF-yciG,yciG 0.165 34
rrfG 0.164 35
ygeK-ygeL 0.162 36
yafK-yafQ-dinJ,yafQ-dinJ 0.161 37
yafL 0.161 38
fimA-fimI-fimC,fimA,fimA-fimI-fimC-fimD-fimF-fimG-fimH 0.160 39
tig-clpP-clpX,tig 0.160 40
stpA 0.160 41
entD-fepA,fepA 0.158 42
fes-entF-fepE-ybdZ,fes-ybdZ 0.158 42
ybcV 0.156 44
ybcW 0.156 45
ybiJ 0.156 46
ysgA 0.156 47
udp-rmuC,udp,udp-rmuC-ubiE-ubiJ-esrE 0.156 47
ydhR 0.154 49
ydhQ 0.154 50
valV-valW 0.154 50
ybhM 0.149 52
borD 0.149 53
rpsP5p 0.147 54
gmr,gmr-yciZ 0.146 55
tas 0.145 56
waaZ-waaY 0.144 57
topB-selD 0.143 58
sdiA-yecC-yecS-dcyD,yecC-yecS-dcyD 0.141 59
ompA 0.139 60
rnlA,rnlA-rnlB 0.139 61
yfjM 0.139 62
ynbA-ynbB-ynbC-ynbD 0.138 63
fur-uof 0.136 64
rpsO,pnp-rpsO 0.135 65
hspQ-rlmI,rlmI 0.131 66
yneL 0.128 67
ygbF 0.125 68
gatC-gatB-gatA 0.125 69
yjiR 0.124 70
yjiT 0.124 71
ycdX-ycdY,ycdX-ycdY-ycdZ 0.124 72
yaiI-aroL-yaiA-aroM-yaiE-ykiA,yaiI-aroL-yaiA,yaiI 0.121 73
exbD-exbB 0.121 74
metC,metC-yghB 0.121 75
paoD-paoC-paoB-paoA 0.120 76
pka 0.120 77
yhiJ 0.119 78
ylcJ 0.118 79
emrE 0.118 80
yneO 0.118 81
ypfJ-purC-bamC-dapA,bamC-dapA 0.115 82
bcp 0.115 83
nupG 0.114 84
nirC 0.113 85
ybhB-bioA,ybhC-ybhB-bioA,bioA 0.112 86
bioB-bioF-bioC-bioD 0.112 86
yciU-clsA 0.112 88
yciY 0.112 89
gstB 0.112 90
dacC 0.112 91
ygiN 0.112 92
fucI 0.111 93
ybaL 0.111 94
narV-narW-narY-narZ 0.110 95
gltA 0.109 96
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX 0.109 97
ybgU 0.109 98
ybgV 0.109 99
tfaX 0.106 100
ybcY 0.106 101
trkA 0.104 102
yijD 0.104 103
rnpB 0.103 104
nuoN-nuoM-nuoL-nuoK-nuoJ-nuoI-nuoH-nuoG-nuoF-nuoE-nuoC-nuoB-nuoA,nuoE-nuoC-nuoB-nuoA,nuoC-nuoB-nuoA,nuoB-nuoA 0.103 105
mog 0.103 106
waaH-tdh-kbl,tdh-kbl 0.103 107
yeaX 0.101 108
yeaI 0.101 109
yaiX 0.101 110
yjiC 0.101 111
ytiC 0.101 111
iraD-ytiD-idlP 0.101 113
iraD-idlP 0.101 114
yeeY 0.100 115
ybaZ 0.100 117
ffs 0.100 117
ybaA 0.100 117