Top Promoters Bound by yhaJ

On this page you can access the list of promoter regions bound by yhaJ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
yqjF 1.000 1
yqjG 1.000 2
yhaJ 0.892 3
yhaK-yhaL 0.892 3
yhhW 0.614 5
azoR 0.534 6
hrpA 0.534 6
yggL,yggN-yggL 0.401 8
dkgA 0.326 9
emrY-emrK 0.298 11
evgL 0.298 11
evgA-evgS,evgA 0.298 11
ybiJ 0.286 13
rfbD-rfbB-wcaN,wcaN 0.260 14
glnX-glnV-metU-glnW-glnU-leuW-metT 0.250 15
sspB-sspA 0.235 16
puuP-ymjE 0.220 17
lptA-lptB,lptA-lptB-rpoN,lptA-lptB-rpoN-hpf 0.216 18
hslU 0.205 19
rraA-menA-hslU-hslV,hslU-hslV 0.205 20
yedQ 0.205 21
yodC 0.205 21
eda 0.193 23
lacI-mhpR 0.187 24
mhpA-mhpB-mhpC-mhpD-mhpF-mhpE 0.187 25
creD 0.182 26
rsmB 0.178 27
asnT 0.174 28
yaaU 0.168 29
ydbC 0.167 30
ccmH-dsbE-ccmF-ccmE-ccmD-ccmC-ccmB-ccmA 0.166 31
bssS 0.165 32
tfaX 0.165 33
dut-ttk 0.163 34
gcl-hyi-glxR-ybbW-allB-ybbY-glxK 0.162 35
hns 0.159 36
pheV 0.155 37
dinI-pyrC,pyrC 0.154 38
lysS-prfB 0.150 39
dxr-ispU-cdsA 0.147 40
mcbA 0.146 41
rlmF 0.146 41
proV-proW-proX 0.142 43
speB-speA 0.139 44
yqgC 0.139 44
speB-speA-yqgB,yqgB 0.139 46
pqiA-pqiB-pqiC 0.135 47
srkA-dsbA 0.133 48
rluB 0.130 49
rem 0.127 50
glnQ 0.127 51
yiiX 0.125 52
ygeP 0.124 53
ygeN-ygeO-insD-4-insC-4-insCD4 0.124 54
hdfR 0.120 55
yifE 0.120 56
glnG-glnL-glnA-yshB,glnG-glnL-glnA,glnL-glnA,glnA 0.120 57
typA 0.120 58
fruA-fruK-fruB 0.118 59
setB 0.118 60
dusB-fis 0.117 61
yceB-grxB,grxB 0.116 62
ycaC 0.115 63
ycaD 0.115 63
rsmG-mnmG-mioC,mioC 0.114 65
tmpR 0.114 66
yhcN 0.114 67
insH-2-nmpC,insH-2 0.112 68
yhiL 0.111 69
nuoG 0.110 70
ymdA-ymdB-clsC,ymdA-ymdB,ymdA 0.109 71
ymdB,ymdB-clsC 0.109 72
garD 0.106 73
ansB 0.106 74
fldB 0.104 75
yqiJ-yqiK 0.104 76
glgS 0.104 77
kdgT 0.104 78
sthA 0.103 79
fabR-yijD 0.103 79
ydcX 0.103 81
ydcY 0.103 82
yncL 0.103 83
yphD-yphE-yphF 0.102 84
yrbL 0.102 85
grxD 0.102 86
mepH 0.102 86
ldcC 0.102 88
rimJ-yceH-yceM,rimJ-yceH-yceM-murJ,rimJ 0.100 89