Top Promoters Bound by yhfR

On this page you can access the list of promoter regions bound by yhfR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
frlA-frlB-frlD-yhfR-frlC 1.000 1
appA 0.194 2
yibG 0.176 3
srlR,srlR-srlQ 0.173 4
yicI-yicJ 0.171 5
selC 0.171 5
yccM 0.170 7
ymgA-ariR 0.170 8
ycgZ-ymgA-ariR-ymgC,ycgZ 0.170 9
bluF 0.170 10
lipA 0.165 11
csiD-lhgO-gabD-gabT-gabP 0.164 12
panC-panB 0.156 13
yhdU 0.153 14
yjaA 0.150 15
tdcF-tdcE-tdcD-tdcC-tdcB-tdcG 0.145 16
yidA 0.142 17
relA,mazE-relA,mazG-mazF-mazE-relA,mazF-mazE-relA 0.139 18
yfiH-rluD-ryfD,yfiH-rluD 0.135 19
insL-3 0.135 20
insL-1 0.135 21
insL-2 0.135 22
lrhA 0.133 23
alaA-yfbR,alaA 0.133 24
mcaS 0.130 25
smrA 0.130 26
hypF-hydN 0.128 27
ycjW 0.125 28
ycjX,ycjX-ycjF-tyrR,ycjX-ycjF 0.125 29
pspE 0.122 30
yneL 0.116 31
ydeR-ydeS-ydeT 0.116 32
ycgX 0.116 33
ymgL 0.116 34
zinT 0.112 35
ygeG 0.111 36
rhtA 0.110 37
ompX 0.110 37
ompX-yliM 0.110 39
pyrG-mazG-mazF-mazE,mazG-mazF-mazE 0.110 40
fsr 0.110 41
ushA 0.110 41
rnlA,rnlA-rnlB 0.109 43
yfjL,yfjK-yfjL 0.109 44
yegH 0.108 45
wcaB-wcaA-wzc-wzb-wza 0.108 46
yfaD-ypaA 0.103 47
cptA-sdhE 0.102 48
ygfZ 0.102 48
yeeN 0.102 50
ybaK 0.102 51
chiX 0.102 52
galP 0.101 53
ygeI 0.101 54
chbR 0.101 55