Top Promoters Bound by yidZ

On this page you can access the list of promoter regions bound by yidZ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs)	Scores	Ranks

blc	1.000	1
mug	0.908	2
ileX	0.908	2
murJ	0.891	4
ftsN-cytR,cytR	0.884	5
trmA	0.791	6
btuB,btuB-murI	0.791	6
dedA-truA-usg-pdxB,truA-usg-pdxB,pdxB	0.745	8
flk	0.745	8
yeaQ	0.719	10
pheV	0.710	11
recJ-dsbC,prfB-recJ-dsbC,dsbC	0.705	12
eutR-eutK-eutL-eutC-eutB,eutK-eutL-eutC-eutB	0.625	13
ybaL	0.608	14
ppiC	0.577	15
yadW	0.538	16
erpA	0.538	16
mdtL	0.528	18
bamB-yfgM,yfgM	0.527	19
leuV	0.527	20
leuV-leuP-leuQ	0.527	20
hypB-hypC-hypD-hypE-fhlA,hypB-hypC-hypD-hypE	0.525	22
uspE-fnr,fnr	0.521	23
fhuC,fhuC-fhuD	0.517	24
ytiB	0.482	25
soxS	0.462	26
ybeF	0.454	27
ligA-zipA-ypeB,ligA-zipA,zipA	0.446	28
cysZ,cysZ-cysK	0.446	28
ilvA	0.442	30
yegW	0.429	31
yciS-yciM,yciS-yciM-pyrF-yciH	0.423	32
soxR	0.419	33
yehF	0.417	34
livJ	0.415	35
exuR	0.412	36
dcp	0.411	37
yabR	0.409	38
wecF	0.408	39
ytjC	0.407	40
cyaR	0.405	41
rhaD-rhaA-rhaB	0.403	42
rhaS-rhaR	0.403	42
araG-araF-araH	0.401	44
fumB	0.401	45
vsr-dcm	0.398	46
metL	0.395	47
ybaZ	0.394	48
ybaA	0.394	48
proC	0.389	50
yaiI-aroL-yaiA-aroM-yaiE-ykiA,yaiI-aroL-yaiA,yaiI	0.389	50
dctA	0.385	52
yjiN-mdtM	0.383	53
yjiP	0.383	53
recQ,recQ-rhtC	0.381	55
polB	0.380	56
pncB	0.375	57
lplT-aas	0.374	59
omrA	0.374	59
omrB	0.374	59
galR	0.374	59
gpmA	0.371	62
yhcC5p	0.367	63
trpS-gph-rpe-dam-damX-aroB-aroK,dam-damX-aroB-aroK,damX-aroB-aroK	0.366	64
yqeG	0.366	65
dosC-yddW,yddW	0.362	66
gloB	0.361	67
yafS	0.361	67
yhbP	0.360	69
pyrD	0.355	70
sdaC-sdaB,sdaC,sdaC-sdaB-ygdG	0.353	71
acrB	0.353	72
abrB	0.353	73
ynfL	0.350	74
emtA	0.348	75
alkB-ada	0.347	76
micL	0.343	77
emrY-emrK	0.342	78
yaaU	0.337	79
gfcD-gfcC-gfcB	0.335	80
insB-4-insA-4-insAB4	0.335	80
apt,apt-dnaX-ybaB	0.334	82
cptA-sdhE	0.333	83
ygfZ	0.333	83
higA-higB	0.332	85
yeeD-yeeE	0.329	86
yffQ-yffR	0.329	87
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC	0.328	88
yibT	0.325	89
yibL	0.325	89
yjbS	0.321	91
ygfI	0.318	92
luxS-gshA,gshA	0.316	93
yjiK	0.313	94
trxC	0.312	95
mliC	0.311	96
aphA-yjbQ-yjbR,aphA	0.308	97
malI	0.307	98
ydfZ	0.303	99
caiE-caiD-caiC	0.297	100
yfjU	0.296	101
yhjB	0.291	102
yhjC,yhjC-yhjD	0.291	102
mqo	0.289	104
umpH	0.288	105
cpxQ	0.286	106
fieF-pfkA,fieF	0.286	106
fpr	0.285	108
rsmJ-prlC,prlC	0.284	109
rlmJ-gor,rlmJ-gor-agrA,rlmJ	0.284	109
yjbD-lysC,lysC	0.284	111
pgi	0.284	111
uvrD	0.282	113
galP	0.279	114
lacY-lacZ,lacA-lacY-lacZ	0.278	115
bcsC-bcsZ-bcsB-bcsA	0.277	116
yoeA	0.277	117
yhcN	0.273	118
ascB	0.272	119
mpaA	0.272	120
sibE	0.269	121
pflA	0.267	122
ribA	0.262	123
pgpB-yciS,pgpB	0.262	123
mtr	0.261	125
rpsP5p	0.260	126
zwf	0.258	127
yebK-pykA,yebK	0.258	127
argX-hisR-leuT-proM	0.256	129
gyrA	0.255	130
polA-spf,polA	0.250	131
proV-proW-proX	0.250	132
yohO	0.249	133
bcsQ	0.246	134
nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC,nnr-tsaE-amiB	0.246	135
queG	0.246	135
glpK	0.245	137
osmB	0.244	138
aat	0.243	139
yegJ	0.243	140
rpoS-nlpD-pcm	0.242	141
yzfA	0.241	142
chpS-chpB	0.241	142
ydcI	0.240	144
ydcJ	0.240	144
ryjA	0.236	146
ghxP-yjcE,ghxP	0.236	146
yadG-yadH-yadI,yadG-yadH	0.236	148
nlpI	0.235	149
hcr	0.235	150
nupX	0.234	151
appA	0.234	152
hupA,hupA-yjaH	0.233	153
yhdV	0.233	154
priA	0.230	155
rpmE	0.230	155
ydhS	0.229	157
hupB,hupB-ppiD	0.228	158
fimB	0.228	159
fimA3p	0.228	159
yhgA	0.228	161
yqjG	0.228	162
yneK	0.226	163
lacI	0.226	164
ygeV	0.225	165
ygeW	0.225	165
mreD-mreC	0.225	167
yceK	0.224	168
ychA-kdsA-rdlA	0.224	169
yneP	0.224	170
fhuA,fhuA-fhuC,fhuA-fhuC-fhuD,fhuA-fhuC-fhuD-fhuB	0.224	171
ycgB	0.223	172
dadA-dadX	0.223	172
exoX	0.222	174
asnT	0.222	175
ybbY-glxK	0.221	176
clsC	0.220	177
ftsP	0.220	178
dinD	0.219	179
sroH	0.218	180
ydgD	0.218	181
psuT	0.215	182
poxB,ybjT-ltaE-poxB	0.214	183
rplF-rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP	0.213	184
fadD-yeaY-tsaB,yeaY-tsaB	0.213	185
yebV	0.212	186
ymdB,ymdB-clsC	0.211	187
hisB-hisH-hisA-hisF-hisI	0.210	188
yagL-yagM	0.210	189
ykgV	0.210	189
rpoD	0.209	191
yhiD	0.208	192
rpoS	0.208	193
ribC	0.207	194
mdtK	0.207	194
phnP-phnO-phnN-phnM-phnL-phnK-phnJ-phnI-phnH-phnG-phnF-phnD-phnC-phnE	0.206	196
ybdO	0.206	197
yjiV	0.206	198
mltA	0.205	199
metZ-metW-metV	0.205	199
wcaM-wcaL-wcaK	0.205	201
brnQ-proY	0.205	202
speD-speE-yacC,yacC	0.204	203
bsmA	0.203	204
yjfP	0.203	204
ysaA-yiaJ,yiaJ	0.202	206
yiaK-yiaL-yiaM-yiaN-yiaO-lyxK-sgbH-sgbU-sgbE	0.202	206
ygiN	0.202	208
insF-2-insE-2-insEF2	0.202	209
yqhA	0.201	210
yghA	0.201	210
hspQ-rlmI,rlmI	0.200	212
yccX	0.200	212