Top Promoters Bound by yidZ

On this page you can access the list of promoter regions bound by yidZ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs)	Scores	Ranks

blc	1.000	1
ileX	0.908	2
mug	0.908	3
murJ	0.891	4
ftsN-cytR,cytR	0.884	5
trmA	0.791	6
btuB,btuB-murI	0.791	7
dedA-truA-usg-pdxB,truA-usg-pdxB,pdxB	0.745	8
flk	0.745	9
yeaQ	0.719	10
pheV	0.710	11
recJ-dsbC,prfB-recJ-dsbC,dsbC	0.705	12
eutR-eutK-eutL-eutC-eutB,eutK-eutL-eutC-eutB	0.625	13
ybaL	0.608	14
ppiC	0.577	15
erpA	0.538	16
yadW	0.538	17
mdtL	0.528	18
bamB-yfgM,yfgM	0.527	19
leuV-leuP-leuQ	0.527	20
leuV	0.527	21
hypB-hypC-hypD-hypE-fhlA,hypB-hypC-hypD-hypE	0.525	22
uspE-fnr,fnr	0.521	23
fhuC,fhuC-fhuD	0.517	24
ytiB	0.482	25
soxS	0.462	26
ybeF	0.454	27
ligA-zipA-ypeB,ligA-zipA,zipA	0.446	28
cysZ,cysZ-cysK	0.446	29
ilvA	0.442	30
yegW	0.429	31
yciS-yciM,yciS-yciM-pyrF-yciH	0.423	32
soxR	0.419	33
yehF	0.417	34
livJ	0.415	35
exuR	0.412	36
dcp	0.411	37
yabR	0.409	38
wecF	0.408	39
ytjC	0.407	40
cyaR	0.405	41
rhaS-rhaR	0.403	42
rhaD-rhaA-rhaB	0.403	43
araG-araF-araH	0.401	44
fumB	0.401	45
vsr-dcm	0.398	46
metL	0.395	47
ybaZ	0.394	48
ybaA	0.394	48
proC	0.389	50
yaiI-aroL-yaiA-aroM-yaiE-ykiA,yaiI-aroL-yaiA,yaiI	0.389	50
dctA	0.385	52
yjiN-mdtM	0.383	53
yjiP	0.383	53
recQ,recQ-rhtC	0.381	55
polB	0.380	56
pncB	0.375	57
omrA	0.374	58
lplT-aas	0.374	59
omrB	0.374	60
galR	0.374	61
gpmA	0.371	62
yhcC5p	0.367	63
trpS-gph-rpe-dam-damX-aroB-aroK,dam-damX-aroB-aroK,damX-aroB-aroK	0.366	64
yqeG	0.366	65
dosC-yddW,yddW	0.362	66
yafS	0.361	67
gloB	0.361	68
yhbP	0.360	69
pyrD	0.355	70
sdaC-sdaB,sdaC,sdaC-sdaB-ygdG	0.353	71
acrB	0.353	72
abrB	0.353	73
ynfL	0.350	74
emtA	0.348	75
alkB-ada	0.347	76
micL	0.343	77
emrY-emrK	0.342	78
yaaU	0.337	79
gfcD-gfcC-gfcB	0.335	80
insB-4-insA-4-insAB4	0.335	80
apt,apt-dnaX-ybaB	0.334	82
cptA-sdhE	0.333	83
ygfZ	0.333	83
higA-higB	0.332	85
yeeD-yeeE	0.329	86
yffQ-yffR	0.329	87
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC	0.328	88
yibT	0.325	89
yibL	0.325	89
yjbS	0.321	91
ygfI	0.318	92
luxS-gshA,gshA	0.316	93
yjiK	0.313	94
trxC	0.312	95
mliC	0.311	96
aphA-yjbQ-yjbR,aphA	0.308	97
malI	0.307	98
ydfZ	0.303	99
caiE-caiD-caiC	0.297	100
yfjU	0.296	101
yhjB	0.291	102
yhjC,yhjC-yhjD	0.291	103
mqo	0.289	104
umpH	0.288	105
fieF-pfkA,fieF	0.286	106
cpxQ	0.286	107
fpr	0.285	108
rsmJ-prlC,prlC	0.284	109
rlmJ-gor,rlmJ-gor-agrA,rlmJ	0.284	110
pgi	0.284	111
yjbD-lysC,lysC	0.284	112
uvrD	0.282	113
galP	0.279	114
lacY-lacZ,lacA-lacY-lacZ	0.278	115
bcsC-bcsZ-bcsB-bcsA	0.277	116
yoeA	0.277	117
yhcN	0.273	118
ascB	0.272	119
mpaA	0.272	120
sibE	0.269	121
pflA	0.267	122
ribA	0.262	123
pgpB-yciS,pgpB	0.262	124
mtr	0.261	125
rpsP5p	0.260	126
yebK-pykA,yebK	0.258	127
zwf	0.258	128
argX-hisR-leuT-proM	0.256	129
gyrA	0.255	130
polA-spf,polA	0.250	131
proV-proW-proX	0.250	132
yohO	0.249	133
bcsQ	0.246	134
nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC,nnr-tsaE-amiB	0.246	135
queG	0.246	135
glpK	0.245	137
osmB	0.244	138
aat	0.243	139
yegJ	0.243	140
rpoS-nlpD-pcm	0.242	141
yzfA	0.241	142
chpS-chpB	0.241	142
ydcJ	0.240	144
ydcI	0.240	145
ghxP-yjcE,ghxP	0.236	146
ryjA	0.236	147
yadG-yadH-yadI,yadG-yadH	0.236	148
nlpI	0.235	149
hcr	0.235	150
nupX	0.234	151
appA	0.234	152
hupA,hupA-yjaH	0.233	153
yhdV	0.233	154
priA	0.230	155
rpmE	0.230	156
ydhS	0.229	157
hupB,hupB-ppiD	0.228	158
fimB	0.228	159
fimA3p	0.228	160
yhgA	0.228	161
yqjG	0.228	162
yneK	0.226	163
lacI	0.226	164
ygeW	0.225	165
ygeV	0.225	166
mreD-mreC	0.225	167
yceK	0.224	168
ychA-kdsA-rdlA	0.224	169
yneP	0.224	170
fhuA,fhuA-fhuC,fhuA-fhuC-fhuD,fhuA-fhuC-fhuD-fhuB	0.224	171
ycgB	0.223	172
dadA-dadX	0.223	172
exoX	0.222	174
asnT	0.222	175
ybbY-glxK	0.221	176
clsC	0.220	177
ftsP	0.220	178
dinD	0.219	179
sroH	0.218	180
ydgD	0.218	181
psuT	0.215	182
poxB,ybjT-ltaE-poxB	0.214	183
rplF-rpsH-rpsN-rplE-rplX-rplN-rpsQ-rpmC-rplP	0.213	184
fadD-yeaY-tsaB,yeaY-tsaB	0.213	185
yebV	0.212	186
ymdB,ymdB-clsC	0.211	187
hisB-hisH-hisA-hisF-hisI	0.210	188
yagL-yagM	0.210	189
ykgV	0.210	190
rpoD	0.209	191
yhiD	0.208	192
rpoS	0.208	193
ribC	0.207	194
mdtK	0.207	195
phnP-phnO-phnN-phnM-phnL-phnK-phnJ-phnI-phnH-phnG-phnF-phnD-phnC-phnE	0.206	196
ybdO	0.206	197
yjiV	0.206	198
mltA	0.205	199
metZ-metW-metV	0.205	200
wcaM-wcaL-wcaK	0.205	201
brnQ-proY	0.205	202
speD-speE-yacC,yacC	0.204	203
bsmA	0.203	204
yjfP	0.203	205
ysaA-yiaJ,yiaJ	0.202	206
yiaK-yiaL-yiaM-yiaN-yiaO-lyxK-sgbH-sgbU-sgbE	0.202	206
ygiN	0.202	208
insF-2-insE-2-insEF2	0.202	209
yqhA	0.201	210
yghA	0.201	211
hspQ-rlmI,rlmI	0.200	212
yccX	0.200	213
ykfM	0.199	214
ilvE-ilvD,ilvE-ilvD-ilvA	0.199	215
ysaA	0.198	216
gntK,gntK-gntU	0.198	217
pheU	0.197	218
lpxA-lpxB,lpxA-lpxB-rnhB,lpxA	0.197	219
aldA	0.195	220
yliI	0.195	221
yheS-yheT-yheU-prkB,yheS-yheT-yheU	0.194	222
kefB-kefG-yheV,kefG	0.194	223
entH	0.193	224
melA-melB	0.193	225
melR	0.193	226
narV-narW-narY-narZ	0.192	227
ygaY	0.192	228
ycgH	0.190	229
trpS-gph-rpe-dam-damX	0.189	230
ftsH-rlmE,rlmE	0.189	231
yhbY	0.189	232
ygbK	0.189	233
gldA-fsaB-frwA	0.187	234
frwC-frwB	0.187	235
hdhA,uidR-hdhA	0.187	236
yldA	0.186	237
yffM-yffN	0.186	238
glyU	0.186	239
ygeQ	0.186	240
hemY-hemX-hemD-hemC,hemD-hemC,hemX-hemD-hemC	0.185	241
cyaA	0.185	241
yjeI	0.184	243
cadA-cadB	0.184	244
ybhN-clsB-ybhP	0.184	245
ydjN	0.179	246
rhmA-rhmT-rhmD-yfaX,rhmD-yfaX	0.179	247
ygcS	0.179	248
cydC-cydD	0.179	249
yjbL-yjbM	0.178	250
zur	0.178	251
rayT	0.178	252
yhiM	0.178	253
phoU-pstB-pstA-pstC	0.178	254
nikR	0.176	255
ycaL	0.175	256
yeeX-yeeA,yeeA	0.175	257
ybjQ-amiD	0.174	258
sraA	0.173	259
rpoH-ftsX-ftsE	0.173	260
hemN	0.172	261
yigF-yigG	0.172	262
sokX	0.172	263
ygcB	0.172	264
gstB	0.171	265
dacC	0.171	266
yieE,yieE-chrR	0.171	267
flc	0.171	268
eptB	0.171	269
ydeM-ydeN,ydeN	0.168	270
ychN	0.167	271
yigE5p	0.167	272
paaK-paaX-paaY,paaK-paaX	0.167	273
sdiA-yecC-yecS-dcyD-fliY,yecC-yecS-dcyD-fliY,fliY	0.166	274
ygbF-ygbT-casE-casD	0.166	275
araJ	0.165	276
yggI	0.165	277
endA,endA-rsmE-gshB-yqgE-yqgF	0.165	278
yjjJ	0.165	279
hslU	0.163	280
aspV	0.163	281
rplX-rplN-rpsQ-rpmC	0.163	282
zntR-yhdN,zntR-yhdN-arfA	0.163	283
fur	0.162	284
fur-uof	0.162	285
ybdD	0.161	286
ydfV	0.159	287
hokD	0.159	288
yaiL	0.159	289
yqfB	0.157	290
bglA	0.157	291
yqfA	0.157	292
ybcH-nfrA,nfrA	0.157	293
ytfL5p	0.156	294
ytfJ	0.156	295
ytfK	0.156	295
yafK-yafQ-dinJ,yafQ-dinJ	0.156	297
yafL	0.156	297
proA-thrW	0.156	299
ykgJ	0.155	300
yraH	0.154	301
ygfI5p	0.154	302
ldtC	0.153	303
gadW	0.152	304
yncI	0.152	305
yncO	0.152	306
ssrS-fau,ssrS,ssrS-fau-sibC	0.152	307
ubiI-ubiH-pepP-ygfB,ubiH-pepP-ygfB	0.152	308
glrK	0.152	309
aqpZ	0.151	310
torD	0.151	311
argR	0.150	312
yqeA	0.150	313
yihN	0.150	314
pabA-fic-yhfG,fic-yhfG	0.149	315
maa-hha	0.149	316
hha-tomB	0.149	317
nemA	0.147	318
ydhL	0.147	319
opgE	0.147	320
nc1	0.147	321
intF	0.147	322
lspA-fkpB-ispH	0.146	323
yadE	0.145	324
yehK	0.145	325
ompX-yliM	0.145	326
rhtA	0.145	327
ompX	0.145	327
ycfZ-ymfA	0.144	329
phoQ	0.144	330
ispU-cdsA-rseP,ispU-cdsA	0.143	331
yejL,yejL-yejM,yejL-yejM-proL	0.143	332
yqcG	0.143	333
queE	0.143	334
ygcG	0.143	335
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT	0.143	336
uhpC-uhpB-uhpA-ilvN-ilvB-ivbL,uhpA-ilvN-ilvB-ivbL,ivbL,ilvN-ilvB-ivbL	0.143	337
dmsC	0.143	338
recA,recX-recA	0.141	339
holD-rimI-yjjG-prfC,holD-rimI-yjjG	0.141	340
rsmC	0.141	341
mepS	0.141	342
pitB	0.141	343
insH-5	0.141	344
stfR-tfaR	0.141	344
hyfA-hyfB-hyfC-hyfD-hyfE-hyfF-hyfG-hyfH-hyfI-hyfJ-hyfR-focB	0.140	346
rihB	0.140	347
yeiL	0.140	348
modF-modE,modE	0.140	349
modA-modB-modC,modA	0.140	350
yfaZ	0.140	351
nudI	0.140	351
iclR	0.140	353
yhdW-yhdX-yhdY-yhdZ	0.139	354
fabZ-lpxA-lpxB,fabZ-lpxA-lpxB-rnhB,fabZ-lpxA,fabZ	0.139	355
ylbI	0.138	356
mcrC-mcrB	0.137	357
symR	0.137	357
tadA-pgpC	0.137	359
valS	0.136	360
narU	0.136	361
acpS-pdxJ-recO-era-rnc,era-rnc,rnc	0.136	362
iadA-yjiG-yjiH	0.135	363
kptA	0.135	363
ompA	0.135	365
fdhE	0.135	366
nlpA	0.135	367
yicS	0.135	367
fucO-fucA	0.135	369
mtr-deaD,deaD	0.134	370
deaD-yrbN,yrbN	0.134	370
yncD	0.134	372
yncE	0.134	372
glcB-glcG	0.134	374
ydiY	0.134	375
pfkB-ydiZ-yniA,pfkB	0.134	376
pyrE-rph,rph	0.133	377
yeaT	0.133	378
ygiD	0.133	379
pflB	0.132	380
aspC	0.132	381
ypfH	0.131	382
ydhB	0.131	383
ydhC	0.131	383
yegQ,yegQ-cyaR	0.131	385
mdtG	0.130	386
bacA	0.130	387
folB,bacA-folB	0.130	388
plsY	0.130	389
coaA	0.128	390
thrU-tyrU-glyT-thrT-tufB-secE-nusG-rplK,thrU-tyrU-glyT-thrT-tufB-secE-nusG,thrU-tyrU-glyT-thrT-tufB	0.128	391
ompN-pfo,pfo	0.128	392
dps	0.128	393
yniA	0.127	394
ydiZ	0.127	395
yqhG	0.126	396
ygcW	0.126	397
yqcE-ygcE	0.126	398
mscL	0.126	399
secM-secA-mutT,secM-secA,secM	0.125	400
ogrK	0.124	401
ubiC-ubiA	0.124	402
yeeP	0.123	403
isrC,flu-isrC	0.123	404
apaH-apaG	0.123	405
yhhW	0.123	406
sixA	0.122	407
tfaX	0.122	408
ispB	0.122	409
acrD	0.122	410
ycaI-msbA-lpxK-ycaQ	0.120	411
accA	0.120	412
pspA-pspB-pspC-pspD-pspE	0.120	413
ygbF-ygbT-casE-casD-casC-casB-casA	0.119	414
iap	0.119	415
yaiC	0.119	416
leuZ-cysT-glyW-pgsA,pgsA	0.119	417
hrpA	0.118	418
degQ,degQ-degS	0.118	419
dmsD	0.118	420
insC-1-insD-1	0.118	421
insC-1-insD-1-insCD1	0.118	421
yaiO	0.118	423
ygjV	0.118	424
rdlC	0.118	425
ldrC	0.118	426
rdgB-yggW	0.118	427
nrdB-yfaE	0.118	428
trpA-trpB-trpC-trpD-trpE-trpL,trpD-trpE-trpL,trpL	0.116	429
ybiA	0.116	430
dinG	0.116	431
yceM	0.116	432
yaiT	0.116	433
yiaY	0.116	434
yfcL-epmC-yfcA-mepA-aroC-prmB,epmC-yfcA-mepA-aroC-prmB	0.116	435
smrB	0.116	436
uspF	0.115	437
cysM	0.115	438
ygiB-ygiC	0.115	439
ykfI-yafW-ykfG-yafX-ykfF-ykfB-ykfH	0.115	440
sodC-ydhF,ydhF	0.114	441
ydhM-nemA-gloA,ydhM,ydhM-nemA-gloA-rnt,ydhM-nemA	0.114	442
ompT-envY	0.114	443
aroD-ydiF,aroD	0.113	444
tnaB	0.113	445
gatC-gatB-gatA	0.113	446
yfbS-yfbT-yfbU,yfbT-yfbU	0.112	447
yfeY-yfeZ-ypeA,yfeZ-ypeA,yfeX-yfeY-yfeZ-ypeA	0.111	448
amiA-hemF	0.111	449
gltS	0.111	450
xanP-yicH,xanP	0.111	450
sieB	0.111	452
ybiJ-ybiI-ybiX-ybiL,ybiI-ybiX-ybiL,ybiL	0.111	453
ldtE	0.111	454
ptrA,recD-recB-ptrA	0.111	455
ydhT-ydhU-ydhX-ydhW-ydhV-ydhY,ydhW-ydhV-ydhY	0.111	456
fur-fldA-ybfE-uof,ybfE	0.111	457
yfhG-glrK-glmY,glmY	0.109	458
yeeR-yeeS-yeeT-cbeA-cbtA-yeeW	0.109	459
tsr	0.109	460
yjiA-yjiX-yjiY,yjiX-yjiY,yjiY	0.109	461
iraD-idlP	0.109	462
grpE	0.109	463
ansA-pncA	0.108	464
yhhS	0.108	465
scpA-argK-scpB-scpC	0.107	466
yfcC	0.107	467
thiF-thiE-thiC-rsd-thiS,rsd	0.107	468
nudC-hemE-nfi,nudC-hemE-nfi-yjaG-hupA	0.107	469
yqeF	0.107	470
rydC	0.107	471
yncP	0.107	472
ydcA	0.107	473
yafF	0.106	474
yafU	0.106	475
rpsD-rpsK-rpsM-rpmJ-secY-rplO-rpmD	0.106	476
rpsK-rpsM-rpmJ-secY-rplO	0.106	477
lipA	0.105	478
rrlH-rrfH	0.105	480
rrlA-rrfA,rrlA	0.105	480
rrlB-rrfB,rrlB	0.105	480
rrlE,rrlE-rrfE	0.105	480
rrfD-rrlD	0.105	483
lolA-rarA	0.104	484
ythA	0.104	485
yhhJ-rbbA-yhiI,rbbA-yhiI	0.104	486
yhiY	0.104	487
mukF-mukE	0.103	488
clpP-clpX	0.103	489
frwD	0.103	490
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB	0.103	491
ymgD-ymgG	0.102	492
ymgJ	0.102	492
rluA-rapA,rapA	0.102	494
lysU	0.102	495
ybiC	0.102	496
fucP-fucI-fucK-fucU-fucR	0.102	497
bcr-rsuA,rsuA	0.102	498
yejH	0.102	499
rsmD-yhhL,rsmD-yhhL-yhhN	0.101	500
opgD-ydcH-rimL,opgD,opgD-ydcH	0.101	501
alaE	0.100	502