Top Promoters Bound by yjjQ

On this page you can access the list of promoter regions bound by yjjQ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
sufD-sufC-sufB-sufA,sufE-sufS-sufD-sufC-sufB-sufA 1.000 1
rydB 1.000 1
glyS-glyQ 0.829 4
ysaB 0.829 4
wecH 0.829 4
ybhL 0.824 6
ymgD-ymgG 0.699 8
ymgI 0.699 8
ymgJ 0.699 8
ymgH 0.699 8
yecF 0.629 11
ghrB 0.591 12
matA 0.585 13
ykgL 0.585 13
cysP-ucpA,ucpA 0.572 15
yhjB 0.565 16
yhjC,yhjC-yhjD 0.565 16
ftsP 0.562 18
insH21 0.560 19
ugd 0.555 20
yiaF 0.523 21
yiaG 0.523 21
galP 0.508 23
cbpM-cbpA 0.484 24
yccE 0.484 24
hslV-ftsN,hslU-hslV-ftsN 0.452 26
ymdA-ymdB-clsC,ymdA-ymdB,ymdA 0.441 27
pgaD-pgaC-pgaB-pgaA 0.413 28
ycdT 0.413 28
yzgL-glgP,glgP 0.412 30
yjaZ 0.410 31
rraA 0.407 32
ftnB 0.406 33
narG,narG-narH-narJ-narI 0.401 34
ftsK 0.388 35
gpsA-secB,cysE-gpsA-secB 0.386 36
zur 0.385 37
yjbL-yjbM 0.385 37
cysC-cysN-cysD,ftsB-ygbE-cysC-cysN-cysD 0.382 39
iap 0.382 39
pinR 0.378 41
ycbJ 0.377 42
yneO 0.377 43
ompN 0.366 44
micC 0.366 44
sucA-sucB,sucA-sucB-sucC-sucD 0.360 46
fhuE 0.355 47
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP 0.355 47
chiP-chiQ 0.351 49
ynaE 0.350 50
ynaM 0.350 50
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplR-rplF-rpsH-rpsN-rplE-rplX-rplN 0.347 52
rplX-rplN-rpsQ-rpmC 0.346 53
yahV 0.341 54
yjiC 0.339 56
ytiC 0.339 56
iraD-ytiD-idlP 0.339 56
iraD-idlP 0.339 56
alsE-alsC-alsA-alsB 0.336 59
deoR-ybjG,ybjG 0.335 60
mdfA 0.335 60
ruvC-yebC-nudB-aspS,yebC-nudB-aspS,aspS 0.334 62
yecD-yecE-yecN-cmoA-cmoB,yecD-yecE 0.334 62
mdtI-mdtJ 0.331 65
ydgV 0.331 65
tqsA 0.331 65
ygeW 0.326 67
caiF 0.324 68
ydfK-ynfT 0.323 69
lrp 0.323 70
yfdY 0.316 71
lpxP 0.316 71
dusB-fis 0.316 73
yahL 0.315 74
yliE-yliF 0.311 75
ypfH-tmcA 0.311 76
rssB-galU,rssB 0.308 77
ykgD 0.307 78
ybdM 0.306 79
ribB 0.306 80
yqiC,yqiC-ygiL 0.306 80
fbp 0.299 82
mpl 0.299 82
hslJ 0.293 84
yhjA 0.284 85
treF 0.284 85
yqeH 0.283 87
yfhL 0.282 88
fic-yhfG-ppiA,yhfG-ppiA,ppiA 0.281 89
tsgA 0.281 89
tfaX 0.279 91
uspB 0.276 92
uspA 0.276 92
wbbH-glf 0.276 94
fimB 0.275 95
fimA3p 0.275 95
yhgF-feoA,yhgF 0.275 97
ydcK 0.272 98
tehA-tehB,tehA 0.272 98
accD,cvpA-dedD-folC-accD,dedD-folC-accD 0.272 100
acrR 0.271 101
paaZ 0.265 102
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH-paaI-paaJ-paaK 0.265 102
ycfJ 0.265 104
yceI-yceJ 0.258 105
panD 0.255 106
yadD 0.255 106
inaA 0.254 108
yfaH 0.254 108
yjcF 0.252 110
yneL 0.250 111
ygaU 0.243 113
yqaE,ygaU-yqaE 0.243 113
ygaV-ygaP 0.243 113
argI 0.240 115
rraB 0.240 115
ydcC 0.237 117
yrbL 0.236 118
yghB 0.234 119
sra 0.234 121
sra-bdm 0.234 121
osmC 0.234 121
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB 0.232 123
ybfD 0.232 124
yhhI 0.232 124
yohH 0.231 126
yohP 0.231 126
yjeM,yjeM-yjeN-yjeO 0.231 128
lysC5p 0.230 129
yjbD 0.230 129
pntB-pntA 0.229 131
ydgH,ydgH-ydgI-folM 0.229 131
rprA 0.229 133
ydiL 0.229 133
hha-tomB 0.229 135
alkB-ada 0.228 136
yqcA-truC-yqcC 0.227 137
btuD-btuE-btuC,btuE-btuC 0.226 138
gcl-hyi-glxR-ybbW-allB-ybbY-glxK 0.223 139
ynfC 0.221 140
ynfD 0.221 140
ybfL 0.221 142
yfcV 0.219 143
yfdE 0.218 144
dtpC 0.217 145
tas 0.216 146
ygfI-yggE-argO,argO 0.216 147
chaA 0.215 149
chaB-chaC 0.215 149
chaC 0.215 149
yjbS 0.213 151
xylB-xylA 0.211 152
xylF-xylG-xylH-xylR 0.211 152
yceG-tmk 0.210 154
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE 0.210 155
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX 0.210 155
truC-yqcC-csrB 0.208 157
guaA-guaB 0.208 158
xseA 0.208 158
yjbT 0.208 160
psiE 0.208 160
rarD 0.207 162
pldA,pldA-recQ 0.207 162
aphA-yjbQ-yjbR,aphA 0.206 164
rcsF-metQ-metI-metN,metQ-metI-metN 0.205 165
gmhB-rrsH,gmhB 0.205 165
yoaC 0.205 167
fruR,fruR-mraZ-rsmH-ftsL 0.201 168