Top Promoters Bound by yjjQ

On this page you can access the list of promoter regions bound by yjjQ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs)	Scores	Ranks

rydB	1.000	1
sufD-sufC-sufB-sufA,sufE-sufS-sufD-sufC-sufB-sufA	1.000	2
ysaB	0.829	3
wecH	0.829	3
glyS-glyQ	0.829	5
ybhL	0.824	6
ymgJ	0.699	7
ymgD-ymgG	0.699	8
ymgH	0.699	9
ymgI	0.699	10
yecF	0.629	11
ghrB	0.591	12
matA	0.585	13
ykgL	0.585	14
cysP-ucpA,ucpA	0.572	15
yhjC,yhjC-yhjD	0.565	16
yhjB	0.565	17
ftsP	0.562	18
insH21	0.560	19
ugd	0.555	20
yiaF	0.523	21
yiaG	0.523	21
galP	0.508	23
cbpM-cbpA	0.484	24
yccE	0.484	24
hslV-ftsN,hslU-hslV-ftsN	0.452	26
ymdA-ymdB-clsC,ymdA-ymdB,ymdA	0.441	27
ycdT	0.413	28
pgaD-pgaC-pgaB-pgaA	0.413	29
yzgL-glgP,glgP	0.412	30
yjaZ	0.410	31
rraA	0.407	32
ftnB	0.406	33
narG,narG-narH-narJ-narI	0.401	34
ftsK	0.388	35
gpsA-secB,cysE-gpsA-secB	0.386	36
zur	0.385	37
yjbL-yjbM	0.385	37
cysC-cysN-cysD,ftsB-ygbE-cysC-cysN-cysD	0.382	39
iap	0.382	40
pinR	0.378	41
ycbJ	0.377	42
yneO	0.377	43
micC	0.366	44
ompN	0.366	45
sucA-sucB,sucA-sucB-sucC-sucD	0.360	46
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP	0.355	47
fhuE	0.355	48
chiP-chiQ	0.351	49
ynaM	0.350	50
ynaE	0.350	51
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplR-rplF-rpsH-rpsN-rplE-rplX-rplN	0.347	52
rplX-rplN-rpsQ-rpmC	0.346	53
yahV	0.341	54
yjiC	0.339	56
ytiC	0.339	56
iraD-idlP	0.339	56
iraD-ytiD-idlP	0.339	58
alsE-alsC-alsA-alsB	0.336	59
deoR-ybjG,ybjG	0.335	60
mdfA	0.335	60
ruvC-yebC-nudB-aspS,yebC-nudB-aspS,aspS	0.334	62
yecD-yecE-yecN-cmoA-cmoB,yecD-yecE	0.334	63
ydgV	0.331	64
tqsA	0.331	65
mdtI-mdtJ	0.331	66
ygeW	0.326	67
caiF	0.324	68
ydfK-ynfT	0.323	69
lrp	0.323	70
yfdY	0.316	71
lpxP	0.316	71
dusB-fis	0.316	73
yahL	0.315	74
yliE-yliF	0.311	75
ypfH-tmcA	0.311	76
rssB-galU,rssB	0.308	77
ykgD	0.307	78
ybdM	0.306	79
ribB	0.306	80
yqiC,yqiC-ygiL	0.306	81
fbp	0.299	82
mpl	0.299	82
hslJ	0.293	84
treF	0.284	85
yhjA	0.284	86
yqeH	0.283	87
yfhL	0.282	88
fic-yhfG-ppiA,yhfG-ppiA,ppiA	0.281	89
tsgA	0.281	90
tfaX	0.279	91
uspB	0.276	92
uspA	0.276	92
wbbH-glf	0.276	94
fimB	0.275	95
fimA3p	0.275	96
yhgF-feoA,yhgF	0.275	97
ydcK	0.272	98
tehA-tehB,tehA	0.272	99
accD,cvpA-dedD-folC-accD,dedD-folC-accD	0.272	100
acrR	0.271	101
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH-paaI-paaJ-paaK	0.265	102
paaZ	0.265	103
ycfJ	0.265	104
yceI-yceJ	0.258	105
panD	0.255	106
yadD	0.255	106
inaA	0.254	108
yfaH	0.254	108
yjcF	0.252	110
yneL	0.250	111
ygaU	0.243	112
ygaV-ygaP	0.243	113
yqaE,ygaU-yqaE	0.243	114
argI	0.240	115
rraB	0.240	116
ydcC	0.237	117
yrbL	0.236	118
yghB	0.234	119
osmC	0.234	120
sra-bdm	0.234	121
sra	0.234	122
mreD-mreC-mreB,yhdE-mreD-mreC-mreB,mreB	0.232	123
yhhI	0.232	124
ybfD	0.232	125
yohH	0.231	126
yohP	0.231	126
yjeM,yjeM-yjeN-yjeO	0.231	128
yjbD	0.230	129
lysC5p	0.230	130
ydgH,ydgH-ydgI-folM	0.229	131
pntB-pntA	0.229	132
rprA	0.229	133
ydiL	0.229	133
hha-tomB	0.229	135
alkB-ada	0.228	136
yqcA-truC-yqcC	0.227	137
btuD-btuE-btuC,btuE-btuC	0.226	138
gcl-hyi-glxR-ybbW-allB-ybbY-glxK	0.223	139
ynfC	0.221	140
ynfD	0.221	141
ybfL	0.221	142
yfcV	0.219	143
yfdE	0.218	144
dtpC	0.217	145
tas	0.216	146
ygfI-yggE-argO,argO	0.216	147
chaA	0.215	148
chaB-chaC	0.215	148
chaC	0.215	150
yjbS	0.213	151
xylF-xylG-xylH-xylR	0.211	152
xylB-xylA	0.211	153
yceG-tmk	0.210	154
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE	0.210	155
rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX	0.210	156
truC-yqcC-csrB	0.208	157
xseA	0.208	158
guaA-guaB	0.208	159
psiE	0.208	160
yjbT	0.208	161
pldA,pldA-recQ	0.207	162
rarD	0.207	163
aphA-yjbQ-yjbR,aphA	0.206	164
gmhB-rrsH,gmhB	0.205	165
rcsF-metQ-metI-metN,metQ-metI-metN	0.205	166
yoaC	0.205	167
fruR,fruR-mraZ-rsmH-ftsL	0.201	168
ymiA-yciX	0.199	169
yfdF	0.199	170
dgoT-dgoK-dgoA-dgoD-dgoR,dgoK-dgoA-dgoD-dgoR	0.198	171
yidX	0.198	171
yfiR-yfiN-yfiB,yfiR-yfiN	0.197	173
racR	0.195	174
ydaS-ydaT-ydaU-ydaV-ydaW-rzpR	0.195	174
yhiJ	0.194	176
yibH-yibI	0.192	177
ychN	0.189	178
ychO	0.189	178
pinH	0.188	180
glvG-glvB-glvC	0.184	181
yidP	0.184	182
ygeF	0.184	183
yqeK	0.184	184
yqeL	0.184	185
ftsH-rlmE,rlmE	0.184	186
ybbY-glxK	0.182	187
yjbI	0.181	188
otsA-otsB	0.181	189
yfjL,yfjK-yfjL	0.180	190
insD-2-insC-2-insCD2	0.180	191
insI-2	0.180	191
yjgL	0.179	193
ybgC-tolQ-tolR-tolA,ybgC-tolQ-tolR-tolA-tolB	0.179	194
murQ-murP-yfeW,murQ-murP	0.178	195
rhtA	0.178	197
ompX-yliM	0.178	197
ompX	0.178	197
micA	0.178	199
luxS	0.178	200
rimJ-yceH-yceM,rimJ-yceH-yceM-murJ,rimJ	0.175	201
mdtH	0.175	202
pqqL	0.175	203
sroA	0.174	204
ycgR	0.174	205
ymgE	0.174	205
araG-araF-araH	0.172	207
ydiF-ydiO	0.172	208
yegH	0.171	209
wcaB-wcaA-wzc-wzb-wza	0.171	210
ymgL	0.170	211
ymgK	0.170	212
uidC-uidB-uidA	0.166	213
gdhA	0.166	214
ynjH	0.166	215
yjbE,yjbE-yjbF-yjbG-yjbH	0.163	216
iraM	0.161	217
eno	0.160	218
yddJ-yddK-yddL	0.160	219
preT-preA	0.159	220
ydeI	0.158	221
ydeJ	0.158	221
lnt-ybeX,ybeX	0.157	223
yrhB	0.156	224
yrhD	0.156	225
yebB	0.155	226
ruvB-ruvA	0.155	227
flgN-flgM	0.154	228
yaaA	0.152	229
yddH	0.152	230
nhoA	0.152	230
galU	0.151	232
potD-potC-potB-potA,potC-potB-potA	0.151	233
pepT	0.151	234
yiaD	0.150	235
bisC	0.150	236
ydiZ	0.150	237
pagP	0.150	238
lit	0.149	239
ymfD-ymfE	0.149	240
yeeN	0.149	241
aceE-aceF	0.149	242
ybdG	0.149	243
lpxC,lpxC-secM	0.148	244
glgS	0.147	245
yqiJ-yqiK	0.147	245
yeiQ	0.146	247
lepA,lepB-lepA	0.146	248
yjbB	0.145	249
lacA-lacY	0.145	250
rrlA-rrfA,rrlA	0.144	251
rrfD-rrlD	0.144	252
plsX-fabH-fabD-fabG	0.144	253
ymiB	0.142	254
srlR,srlR-srlQ	0.142	255
yeaD	0.142	256
zntR-yhdN,zntR-yhdN-arfA	0.141	257
typA5p	0.140	258
glnG-glnL	0.140	259
ybcL-ybcM	0.140	260
naRNA6	0.139	261
yjdN	0.139	262
idnK	0.139	263
idnR-idnT-idnO-idnD	0.139	264
proV-proW-proX	0.137	265
menE-menC-menB	0.137	266
yraP	0.136	267
glgB-asd,asd	0.136	268
folX-yfcH	0.136	269
ytfJ	0.135	270
ytfK	0.135	270
ytfL5p	0.135	272
zntA,zntA-yhhQ	0.135	273
rrlH-rrfH	0.135	274
ydeA	0.135	275
malF-malE,malG-malF-malE	0.134	276
malK,malK-lamB-malM	0.134	277
yegP	0.133	278
yegQ,yegQ-cyaR	0.133	279
mfd	0.133	280
ileY	0.132	281
ygaQ	0.132	281
eptC	0.131	283
chiQ	0.131	284
ridA	0.129	285
mcbA	0.128	286
rlmF	0.128	286
yaaW	0.128	288
yaaI	0.128	289
dnaK-dnaJ-insL-1,dnaK-dnaJ,dnaK	0.128	290
yeaI	0.128	291
yafK	0.127	292
ompT	0.126	293
yccM	0.125	294
tufA	0.125	295
spy	0.125	296
alkA	0.123	297
hofC-hofB-ppdD	0.123	298
ycgG	0.123	299
iraP-phoA,iraP	0.123	300
phoA-psiF	0.123	301
ddlA	0.123	302
purF-cvpA-dedD,cvpA-dedD,dedD	0.122	303
uspF	0.121	304
ysdD	0.121	305
recF-dnaN-dnaA,dnaN-dnaA	0.121	306
rpmH-rnpA-yidD,rpmH-rnpA,rpmH-rnpA-yidC-mnmE-yidD,rpmH,rpmH-rnpA-yidC-yidD	0.121	307
yihQ	0.121	308
rplJ-rplL-rpoB-rpoC,rplJ-rplL	0.121	309
ybhB-bioA,ybhC-ybhB-bioA,bioA	0.120	310
bioB-bioF-bioC-bioD	0.120	310
rpoS	0.120	312
yibS	0.119	313
yhfK	0.119	314
ygfK-ssnA	0.117	315
ybcH-nfrA,nfrA	0.116	316
elfD-elfC-elfG-ycbU-ycbV-ycbF	0.115	317
yhgN	0.115	318
ybdO	0.115	319
yciE-yciF-yciG,yciG	0.115	320
xisD	0.114	321
intD	0.114	322
kdgT	0.113	323
yegI	0.112	324
yegJ	0.112	324
yhiD-hdeB-hdeA,hdeB-hdeA	0.112	326
hdeD	0.112	326
ybeQ	0.112	328
ybeR-djlB	0.112	329
wbbL	0.111	330
yhgA	0.111	331
yhdW-yhdX-yhdY-yhdZ	0.111	332
accB-accC,accB-accC-yhdT	0.111	333
yrhA	0.110	334
yddG	0.110	335
fdnG-fdnH-fdnI,fdnG	0.110	335
yjjQ-bglJ	0.109	337
ampD-ampE	0.109	338
mdtE-mdtF	0.109	339
agaS-kbaY-agaB-agaC-agaD-agaI	0.109	340
uspE-fnr,fnr	0.109	341
acrB	0.108	342
flhC-flhD	0.108	343
luxS-gshA-yqaA-yqaB,yqaA-yqaB	0.108	344
yoeF	0.107	345
insZ	0.107	346
yfdK-yfdL-yfdM-yfdN-oweS	0.107	347
dps	0.107	348
ygjP	0.105	349
rlmG	0.105	350
atpG-atpA-atpH-atpF,atpA-atpH-atpF	0.105	351
acuI	0.104	352
mreB-csrD,csrD	0.104	353
insL-3	0.103	354
eda-edd	0.103	355
pbpG	0.102	356
yfjH	0.102	357
yfjI	0.102	357
rcsA	0.102	359
yigF-yigG	0.102	360
yebV	0.101	361
rem-hokD-relE-relB,hokD-relE-relB,relE-relB	0.101	362
ydfV	0.101	362
flxA	0.101	364
yijF	0.101	365
yjaB	0.101	366
metA	0.101	366
ybhI	0.100	368