Top Promoters Bound by yncC

On this page you can access the list of promoter regions bound by yncC. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs)	Scores	Ranks

yiiX	1.000	1
yiiX-metJ,metJ	0.993	2
metB-metL	0.993	2
yiaF	0.910	4
yiaG	0.910	4
yfjJ	0.905	6
cutA-dcuA-aspA,dcuA-aspA,aspA	0.888	7
fxsA	0.888	7
yagI-argF,argF	0.857	10
argL	0.857	10
ykgS	0.857	10
ybcH	0.850	12
intE-xisE-ymfH	0.843	13
ykfJ-prfH	0.836	14
mug	0.772	15
ileX	0.772	16
citB	0.728	17
dmsA-dmsB-dmsC,dmsA-dmsB	0.700	18
vsr-dcm	0.693	19
yejG	0.686	20
dnaB-alr,dnaB	0.670	21
qorA	0.670	22
cspC-yobF	0.663	23
kdpE-kdpD,kdpD	0.644	24
ykgP	0.630	25
eaeH-insE-1-insF-1-insEF1	0.630	26
gadW	0.584	27
gadY	0.584	27
insH-6	0.581	29
treC-treB,treB	0.571	30
yegJ	0.571	31
ppsA	0.570	32
ydiA-aroH,ydiA	0.570	32
fimE	0.569	34
slyA	0.556	35
ydhI-ydhJ-ydhK,ydhI-ydhJ	0.556	35
yghU	0.552	37
gss	0.552	38
uacT	0.515	39
ygfS-ygfT	0.515	40
bluF	0.512	41
yafZ-ykfA,ykfA	0.499	42
yhiS	0.487	43
preT-preA	0.475	44
prpR	0.473	45
murA	0.473	46
murA-ibaG,ibaG	0.473	47
yeeY	0.468	48
mepS	0.461	49
yecN-cmoA-cmoB	0.460	50
cmoA-cmoB	0.460	50
ymiA-yciX	0.456	52
ybeF	0.454	53
yghG	0.444	54
alaX-alaW	0.442	55
yfeC-yfeD	0.442	55
rpsB-tsf,rpsB-tsf-pyrH-frr	0.429	57
rpsB-tsf-pyrH-frr-tff,rpsB-tff,rpsB-tsf-tff	0.429	58
dapD-glnD-map,glnD-map,map	0.429	59
gadX,gadW-gadX	0.427	60
putP	0.410	61
yqiD	0.410	62
ymfI	0.407	63
yhiL	0.404	64
yhiM	0.404	65
dusA-pspG,dusA	0.404	66
yrfG-hslR,yrfG-hslR-hslO	0.404	67
mdaB,mdaB-ygiN	0.396	68
ygiZ	0.396	69
gltF	0.393	70
hisS-ispG-yfgA,yfgA	0.381	71
ykgL	0.380	72
yfiE	0.371	73
insI-2	0.370	74
insI-1	0.370	75
kilR-ydaE	0.363	76
racC	0.363	77
ykiD	0.359	78
ykiA	0.359	79
ecpE-ecpD-ecpC-ecpB	0.357	80
recQ,recQ-rhtC	0.354	81
ftsH-rlmE,rlmE	0.346	82
yhbY	0.346	82
yadG-yadH-yadI,yadG-yadH	0.333	84
can	0.333	85
ymfD-ymfE	0.328	86
yagG-yagH	0.323	87
apaH-apaG-rsmA-pdxA-surA,surA,rsmA-pdxA-surA	0.321	88
nc4	0.318	89
yciE-yciF-yciG,yciG	0.314	90
lrhA	0.311	91
puuC-puuB-puuE	0.309	92
valS	0.309	93
ynfC	0.307	94
ynfE-ynfF-ynfG-ynfH-dmsD	0.307	95
ynfD	0.307	96
pflB-focA,focA	0.307	97
yphA	0.295	98
yjhU	0.292	99
ytcA	0.286	100
mdtP-mdtO-mdtN	0.286	101
codB-codA	0.283	102
yafL	0.278	103
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP	0.273	104
fhuE	0.273	105
yohP	0.271	106
yohH	0.271	107
envR	0.270	108
acrE-acrF	0.270	108
eutM-eutD-eutT-eutQ-eutP-eutS	0.270	110
feoA-feoB-feoC	0.268	111
insO	0.268	112
maa	0.267	113
ydbH-ynbE-ydbL	0.266	114
yfjX-yfjY-yfjZ-ypjF-ypjJ	0.262	115
ydeM	0.262	116
deoR	0.261	117
lysT-valT-lysW-valZ-lysY-lysZ-lysQ,lysT-valT-lysW	0.260	118
rimK-ybjN	0.258	119
glpK	0.258	120
ybfF,fldA-ybfE-ybfF	0.257	121
seqA-pgm-ybfP,seqA-pgm	0.257	122
wbbH-glf	0.243	123
rseX	0.243	124
yedJ-yedR	0.243	125
yedS	0.243	126
ileY	0.242	127
ygaQ	0.242	128
och5	0.239	129
yhjY	0.237	130
tag-yiaC	0.237	131
yneL-hipA-hipB,hipA-hipB	0.237	132
gltW	0.234	133
xapR	0.233	134
ygeQ	0.233	135
yagU	0.230	136
paoD-paoC-paoB-paoA	0.230	137
ygcQ-ygcR	0.226	138
mltD	0.225	139
flgK-flgL	0.222	140
pitB	0.220	141
nadK-recN,nadK	0.220	142
ybiX	0.218	143
yafK-yafQ-dinJ,yafQ-dinJ	0.216	144
tfaX	0.214	145
ydcR	0.214	146
hybB-hybA-hybO-yghW,yghW	0.213	147
sugE	0.212	148
iraP-phoA,iraP	0.210	149
ddlA	0.210	150
pphB	0.207	151
nrdA-nrdB-yfaE	0.207	152
yfaL	0.207	153
pheM-rplT-rpmI-infC,rplT-rpmI-infC,infC	0.207	154
flc	0.205	155
ybeM	0.205	155
ynaK-ydaY	0.204	157
mazF-mazE-relA-rlmD,mazE-relA-rlmD,rlmD	0.203	158
yeaG-yeaH	0.203	159
mipA	0.203	160
aaeB-aaeA-aaeX	0.203	161
aaeR	0.203	161
ryeA	0.203	163
frvR-frvX-frvB-frvA	0.203	164
proV-proW-proX	0.201	165
yrhD	0.201	166
ecpA	0.201	167
yafS	0.201	168
ydiP	0.198	169
ydiQ-ydiR-ydiS-ydiT-fadK	0.198	169
leuZ-cysT-glyW-pgsA,pgsA	0.198	171
mug-yqjH,yqjH	0.197	172
yqjI	0.197	172
ydeQ	0.196	174
rlmA	0.195	175
ansB	0.194	176
cpxQ	0.193	177
fieF-pfkA,fieF	0.193	178
rpoD	0.192	179
rnlB	0.191	180
yeaI	0.190	181
lolC-lolD-lolE,lolC-lolD-lolE-nagK	0.190	182
ybdO	0.189	183
ydeP	0.187	184
ygaZ-ygaH-mprA-emrA,ygaZ-ygaH	0.185	185
gspB-gspA	0.184	186
gspC-gspD-gspE-gspF-gspG-gspH-gspI-gspJ-gspK-gspL-gspM-gspO	0.184	186
glnS	0.184	188
ybcL-ybcM	0.184	189
yicH	0.184	190
proC	0.184	191
aroL-yaiA-aroM,aroL-yaiA	0.184	192
yodB	0.182	193
cysB	0.182	194
murQ-murP-yfeW,murQ-murP	0.180	195
yfeT	0.180	196
ytfP	0.180	197
dhaM-dhaL-dhaK	0.177	198
yadE	0.175	199
djlA,djlA-yabP-yabQ	0.175	200
pdxA-surA-lptD,surA-lptD,lptD	0.175	201
yicI-yicJ	0.173	202
selC	0.173	202
sokX	0.173	204
ygcB	0.173	205
ygeK-ygeL	0.171	206
yniD	0.171	207
mscK	0.171	208
yjjZ	0.170	209
fhuF	0.170	210
ygiN	0.170	211
yjbL-yjbM	0.170	212
zur	0.170	213
yegD	0.169	214
alkA	0.169	215
insI-3	0.169	216
ydcP	0.168	217
glxK	0.167	218
yfeA	0.166	219
yzcX	0.165	220
yjfK-yjfL-yjfM-yjfC	0.164	221
kefF-kefC,kefF-kefC-folA	0.163	222
ushA	0.163	223
fsr	0.163	224
yggX,yggX-mltC-nupG,yggX-mltC	0.162	225
ykfI-yafW-ykfG-yafX-ykfF-ykfB-yafY-ykfH	0.162	226
ybjN,ybjN-potF	0.162	227
hybG-hybF-hybE-hybD-hybC-hybB-hybA-hybO,hybB-hybA-hybO,hybA-hybO	0.161	228
rhsO-ybfC	0.160	229
ysaA-yiaJ,yiaJ	0.160	230
yiaK-yiaL-yiaM-yiaN-yiaO-lyxK-sgbH-sgbU-sgbE	0.160	231
opgG-opgH	0.159	232
opgC	0.159	233
lgt,ppdA-thyA-lgt,thyA-lgt	0.158	234
sdaC-sdaB,sdaC,sdaC-sdaB-ygdG	0.157	235
yjjP	0.157	236
xylE	0.156	237
yhjH	0.156	238
kdgK	0.156	239
adiA	0.156	240
bdcA	0.156	241
tabA	0.156	242
oxyS	0.154	243
fhuA,fhuA-fhuC,fhuA-fhuC-fhuD,fhuA-fhuC-fhuD-fhuB	0.154	244
ydfJ	0.153	245
pqqL	0.153	246
yciN	0.152	247
topA	0.152	247
yhhH	0.152	249
ybeQ	0.151	250
ybeR-djlB	0.151	251
yjiT	0.151	252
uspG	0.151	253
ybdR	0.151	253
fucR	0.151	255
rhsB	0.151	256
yqeH	0.150	257
dinQ	0.150	259
agrA	0.150	259
arsR-arsB-arsC	0.150	259
agrB	0.150	261
yjhR	0.149	262
yjhZ	0.149	263
ynjI	0.149	264
ycgZ-ymgA-ariR-ymgC,ycgZ	0.148	265
ompG	0.147	266
ynbA-ynbB-ynbC-ynbD	0.147	267
galM-galK-galT-galE,galK-galT-galE,galT-galE,galE	0.146	268
ypjI	0.146	269
ysaA	0.145	270
zinT	0.144	271
chiP-chiQ	0.144	272
ymdG	0.143	273
putA	0.143	274
xylB-xylA	0.143	275
sthA	0.142	276
fabR-yijD	0.142	277
yfjR-ypjK-yfjS-yfjT	0.142	278
yaiO	0.142	280
insC-1-insD-1	0.142	280
insC-1-insD-1-insCD1	0.142	280
yaaI	0.141	282
dnaK-dnaJ-insL-1,dnaK-dnaJ,dnaK	0.141	283
yhhI	0.140	284
bhsA	0.139	285
metF	0.139	286
psiE	0.138	287
yjbT	0.138	288
ypjA	0.138	289
tdk	0.138	290
yiiG	0.138	291
rseP	0.138	292
glnU-leuW-metT-asnB,asnB,glnW-glnU-leuW-metT-asnB	0.138	293
soxS	0.138	294
tsaE-amiB,tsaE-amiB-mutL,tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC	0.137	295
mntR,mntR-ybiR	0.136	296
opgE	0.136	297
rybA-mntS	0.136	297
ymiD	0.134	299
yciT	0.134	300
yciT-yciZ	0.134	301
gadC	0.134	302
ybaE	0.133	303
cof	0.133	303
ygjR	0.133	305
pagP	0.131	306
dcuC	0.131	307
phoE	0.131	308
proB,proB-proA,proB-proA-thrW	0.131	308
yhiJ	0.131	310
sraA	0.130	311
lon-hupB,lon	0.130	312
ydeM-ydeN,ydeN	0.130	313
tnaC,tnaC-tnaA	0.130	314
yeaC-msrB,msrB	0.130	315
gapA,gapA-yeaD	0.130	315
yfhH	0.129	317
tadA-pgpC	0.129	318
grxA	0.128	319
ybjC-nfsA-rimK-ybjN	0.128	320
lpxT	0.128	321
eptC	0.128	322
aidB	0.128	323
ybcJ-folD	0.127	324
sfmA	0.127	325
rsmE-gshB-yqgE-yqgF,rsmE-gshB	0.126	326
dacB	0.126	327
rlmE-greA,greA	0.126	328
yhcB,yhcB-degQ	0.125	329
mdtI-mdtJ	0.125	330
clcB	0.125	331
aslA	0.125	332
glmZ	0.125	333
rhaD	0.125	334
garR	0.125	335
ogrK	0.124	336
ydgC	0.123	337
yfgO	0.123	338
yjjJ	0.123	339
rluB	0.122	340
gadX-gadA	0.122	341
ldrC	0.122	342
thrW	0.120	343
hdhA,uidR-hdhA	0.119	344
ubiG	0.119	345
gyrA	0.119	346
yafT	0.117	347
ybgD	0.117	348
tus	0.117	349
ykgV	0.117	350
yagL-yagM	0.117	351
ybhI	0.116	352
yfgH-yfgI	0.116	353
ydcH	0.116	354
ybcK	0.116	355
folX-yfcH	0.116	356
apaH-apaG	0.116	357
cptA-sdhE	0.115	358
ygfZ	0.115	358
bcsZ-bcsB	0.115	360
purB-hflD	0.114	361
nadE,nadE-cho	0.114	362
osmE	0.114	363
ykgJ	0.114	364
yceB-grxB,grxB	0.114	365
yigF-yigG	0.114	366
ais	0.114	367
arnB-arnC-arnA-arnD-arnT-arnF-arnE	0.114	367
sppA,sppA-ansA	0.113	369
topB-selD-ydjA	0.113	370
wbbL	0.112	371
yiiE	0.112	372
clsC	0.112	373
yiiF	0.112	374
yijF	0.111	375
insB-1-insA-1-insAB1	0.111	376
cadC	0.110	377
ftnA	0.110	378
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB	0.110	379
uspE-fnr,fnr	0.110	380
yqfE	0.109	381
argP	0.109	382
tusE	0.108	383
ydjM	0.108	384
panD	0.107	385
yadD	0.107	385
pta	0.107	387
yeeX	0.107	388
yfgJ-der	0.107	389
glgS	0.106	390
yqiJ-yqiK	0.106	390
cydA-cydB-ybgE-cydX,cydA-cydB,cydA-cydB-ybgE-ybgC-cydX,cydA,cydA-cydB-cydX	0.106	392
add	0.106	393
tas	0.105	394
ygdR	0.105	395
frmB-frmA-frmR	0.104	396
tehA-tehB,tehA	0.104	397
yegZ-yegR	0.104	398
yegS	0.104	399
ygeI	0.104	400
tufA	0.104	401
yjdC	0.103	402
ygeH	0.103	403
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC	0.102	404
ygeX	0.102	405
degS	0.102	406
gloB	0.101	407
galU	0.101	408
yfiL	0.101	409
basS-basR,basR	0.101	410
rcnB	0.101	411
ydjX-ydjY-ydjZ-ynjA-ynjB-ynjC-ynjD,ydjX-ydjY-ydjZ-ynjA	0.101	412