Top Promoters Bound by argR

On this page you can access the list of promoter regions bound by argR. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

Type in the header boxes to filter rows. Click headers to sort columns.

Promoter (TUs) Scores Ranks
argE 1.000 1
argC-argB-argH 1.000 1
carA,carA-carB 0.947 3
yqeL 0.928 5
yqeK 0.928 5
ygeF 0.928 5
yiiM 0.839 7
yraH 0.779 8
amiC 0.751 9
argA 0.751 9
ybiA 0.736 11
dinG 0.736 11
ygiS 0.701 13
smf 0.700 14
def-fmt-rsmB,def-fmt,def-fmt-rsmB-trkA 0.700 14
pnp-rpsO-truB-rbfA-infB-nusA-rimP-metY,infB-nusA-rimP-metY,nusA-rimP-metY,metY 0.682 16
argG 0.682 16
argI 0.678 18
rraB 0.678 18
ridA-pyrI-pyrB 0.664 20
ridA-pyrI-pyrB-pyrL 0.664 20
mdh 0.612 22
argR 0.612 22
artM-artQ-artI-artP 0.586 24
yeeP 0.584 25
fepC-fepG-fepD,fepG-fepD 0.495 26
entS 0.495 26
yfcC 0.481 28
dtpD 0.474 29
ybgI-ybgJ-ybgK-ybgL,ybgI-ybgJ-ybgK-ybgL-nei 0.474 29
gltP 0.469 31
ydhB 0.467 32
ydhC 0.467 32
yhcC 0.464 34
yceI-yceJ 0.458 35
ubiX-purF-cvpA,purF-cvpA 0.455 36
mcaS 0.446 37
smrA 0.446 37
recA,recX-recA 0.444 39
trxB 0.437 40
lrp 0.437 40
asnT 0.434 42
yjhP 0.431 43
ygeG 0.429 44
infB-nusA-rimP,nusA-rimP 0.405 45
artJ 0.399 46
yjeV 0.388 47
ybcL-ybcM 0.387 48
ldtA-cobT-cobS-cobU,cobT-cobS-cobU,cobS-cobU 0.383 49
yihR 0.382 50
yhfL 0.378 51
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC 0.372 52
ydjF 0.369 53
pgl 0.364 54
ybdD 0.359 55
thiQ-thiP-thiB 0.358 56
sroA 0.358 56
sufD-sufC-sufB-sufA,sufE-sufS-sufD-sufC-sufB-sufA 0.351 58
aroP 0.340 59
pdhR,pdhR-aceE-aceF-lpd 0.340 59
gltB-gltD-gltF 0.332 61
proV-proW-proX 0.327 62
mprA-emrA-emrB 0.323 63
yphG 0.321 64
yphH 0.321 64
poxB-hcr-hcp,hcr-hcp 0.321 66
yraQ 0.307 67
ycgX 0.305 68
yafU 0.302 69
fabD-fabG-acpP 0.301 70
yfdE 0.299 71
yeeY-yeeZ-yefM-yoeB,yeeZ-yefM-yoeB,yefM-yoeB 0.298 72
hisL-hisG-hisD-hisC-hisB-hisH-hisA-hisF-hisI,hisL 0.298 72
mgtT 0.291 74
mgrR 0.291 74
fimA3p 0.290 76
ftnB 0.287 77
yaiY 0.286 78
yaiZ 0.286 78
hisP-hisM-hisQ-hisJ 0.280 80
plsB 0.275 81
dgkA,dgkA-lexA 0.275 81
glpQ 0.266 83
sra 0.259 85
sra-bdm 0.259 85
osmC 0.259 85
cbrB-cbrC,cbrB 0.258 87
stpA 0.256 88
alaE 0.256 88
ybeF 0.253 90
waaU-waaZ-waaY-waaR-waaO-waaB-waaS-waaP-waaG-waaQ,waaS-waaP-waaG-waaQ,waaP-waaG-waaQ 0.253 92
waaU-waaZ-waaY-waaR-waaO-waaB-waaS-waaP-waaG-waaQ-rirA 0.253 92
waaA-coaD,waaA 0.253 92
yjgR 0.252 94
yagI-argF,argF 0.248 96
argL 0.248 96
ykgS 0.248 96
yeaK-yeaL,yeaK 0.246 98
insH-7 0.244 99
yafK-yafQ-dinJ,yafQ-dinJ 0.240 100
yafL 0.240 100
ykfI-yafW-ykfG-yafX-ykfF-ykfB-ykfH 0.237 102
kch 0.236 103
yidE 0.235 104
mutL-miaA-hfq-hflX-hflK-hflC,mutL-miaA-hfq 0.233 105
ugpB,ugpQ-ugpC-ugpE-ugpA-ugpB 0.232 106
minE-minD-minC 0.230 107
ycgJ 0.230 107
maa-hha 0.228 109
hha-tomB 0.228 109
yjeM,yjeM-yjeN-yjeO 0.228 111
purB-hflD-mnmA,mnmA 0.225 112
nanS 0.225 113
yceB 0.219 114
ygdI 0.218 115
csdA-csdE 0.218 115
yfgO 0.214 117
bepA-yfgD 0.214 117
ymgD-ymgG 0.214 120
ymgI 0.214 120
ymgJ 0.214 120
ymgH 0.214 120
ybgD 0.213 123
envR 0.213 124
acrE-acrF 0.213 124
aspV 0.212 126
yafT 0.212 126
cobC-nadD-holA-lptE-leuS,holA-lptE-leuS,lptE-leuS 0.211 128
ybeL 0.211 128
htrE-yadV 0.209 130
ychA-kdsA-rdlA 0.208 131
wcaB-wcaA-wzc-wzb-wza 0.206 132
gnsB 0.205 133
xapB-xapA 0.203 134
yfeN 0.203 134
ybaL 0.203 136
pncB 0.203 137
pepN 0.203 137
yedV-yedW,yedW 0.202 139
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT 0.202 139
ycaI-msbA-lpxK-ycaQ 0.201 141
intF 0.201 142
nc1 0.201 142
parC,plsC-parC 0.201 144
ybhL 0.200 145
fdhE 0.200 146