Top Promoters Bound by ybaQ

On this page you can access the list of promoter regions bound by ybaQ. Promoter regions are named by the RegulonDB list of Transcription Units (TUs) that start with the same gene and defined as the 500bp upstream and 200bp downstream of the TU start position. TF promoter scores are scaled so that 1 is the top scoring promoter for a TF and 0 is a the average score across all promoters for the TF. Promoters are then ranked with 1 being the strongest scoring promoter. Only promoters with a TF hit scoring above 0.2 are shown.

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Promoter (TUs) Scores Ranks
hybG-hybF-hybE-hybD-hybC 1.000 1
torS 0.960 2
torT 0.960 3
mhpA-mhpB-mhpC-mhpD-mhpF-mhpE 0.937 4
lacI-mhpR 0.937 5
helD 0.915 6
yebW 0.889 7
fabG-acpP 0.824 8
ibpA,ibpB-ibpA 0.763 9
yidQ 0.763 9
codB-codA 0.708 11
yicN 0.681 12
hldE,hldE-sibD-sibE,hldE-sibE 0.657 13
pinH 0.637 14
torD 0.633 15
ybaY 0.600 16
lysR 0.587 17
lysA 0.587 18
perR 0.579 19
insI-1-insN-eyeA 0.579 20
menF-elaB-elaA,elaB-elaA,elaA 0.563 21
lspA-fkpB-ispH 0.552 22
ygjR 0.515 23
yafV 0.490 24
flu 0.470 25
isrC,flu-isrC 0.470 26
ileX 0.465 27
ilvA 0.463 28
macB 0.458 29
panD 0.457 30
yadD 0.457 31
ydeA 0.455 32
frlA-frlB-frlD-yhfR-frlC 0.451 33
yhfL 0.451 34
ybfP 0.449 35
ygeR,glyU-ygeR 0.446 36
rbsD-rbsA-rbsC-rbsB,rbsD-rbsA-rbsC-rbsB-rbsK-rbsR 0.440 37
ychA-kdsA-rdlA 0.439 38
apaH-apaG-rsmA-pdxA,rsmA-pdxA 0.429 39
yniD 0.426 40
insZ 0.422 41
mtr 0.422 42
yceA 0.416 43
ecnA-ecnB 0.416 44
epmB 0.416 45
leuU-secG-glmM,glmM 0.414 46
obgE-yhbE 0.412 47
ydcP 0.409 48
ppk,ppk-ppx 0.407 49
ybgD 0.402 50
recQ,recQ-rhtC 0.400 51
istR 0.395 52
tisB 0.395 52
uhpC-uhpB-uhpA-ilvN-ilvB-ivbL,uhpA-ilvN-ilvB-ivbL,ivbL,ilvN-ilvB-ivbL 0.395 54
ycfJ 0.394 55
rpoS-nlpD 0.393 56
hscA-hscB-iscA 0.381 57
iscX-fdx-hscA-hscB 0.381 58
kdgT 0.376 59
lpxT 0.375 60
ubiX-purF-cvpA,purF-cvpA 0.374 61
ubiF 0.373 62
murJ 0.370 63
ymdA-ymdB-clsC,ymdA-ymdB,ymdA 0.357 64
ymdB,ymdB-clsC 0.357 65
ybdG 0.356 66
dtpC 0.354 67
hypB-hypC-hypD-hypE-fhlA,hypB-hypC-hypD-hypE 0.354 68
ygbL-ygbM 0.351 69
polB 0.347 70
ybdG-nfsB,nfsB 0.338 71
dedD-folC 0.338 72
ygeA 0.335 73
ssrA 0.333 74
pdxY-tyrS,tyrS 0.333 75
luxS-gshA-yqaA-yqaB,yqaA-yqaB 0.331 76
bamA,bamA-skp,bamA-skp-lpxD-fabZ-lpxA-lpxB-rnhB-dnaE 0.327 77
trkG 0.325 78
rzoD 0.325 79
rzoR 0.325 79
yeiI 0.320 81
hupB,hupB-ppiD 0.319 82
pnuC 0.318 83
arcB 0.317 84
flgN-flgM 0.316 85
exuR 0.312 86
ygiM,ygiM-cca 0.311 87
glnE-ygiF 0.311 88
omrB 0.310 89
galR 0.310 89
creD 0.308 91
yjbB 0.305 92
zwf 0.304 93
yebK-pykA,yebK 0.304 93
dksA-sfsA-ligT,ligT 0.304 95
pssL 0.303 96
pssA,pssA-yfiM 0.303 96
dhaM-dhaL-dhaK 0.301 98
pbpG 0.298 99
ythB 0.293 100
yihN 0.291 101
gpp 0.289 102
ulaD-ulaE 0.287 103
ynaK-ydaY 0.285 104
yaaU 0.285 105
pheV 0.282 106
yeeR-yeeS-yeeT-cbeA-cbtA-yeeW 0.281 107
tesB 0.280 108
pmrD 0.279 109
yabI 0.277 110
rhmA-rhmT-rhmD-yfaX,rhmD-yfaX 0.274 111
yfjP-yfjQ 0.273 112
yegJ 0.270 113
gcl-hyi-glxR-ybbW-allB-ybbY-glxK 0.270 114
gpp-rhlB,rhlB 0.268 115
rhoL-rho,rhoL-rho-wecA,rhoL-rho-wecA-wzzE,rhoL 0.268 116
yhjK 0.267 117
uxuR 0.266 118
citB 0.266 119
ascB 0.265 120
umpH-nagC-nagA-nagB,nagC-nagA-nagB 0.263 121
nagE 0.263 121
uspF 0.262 123
truC-yqcC-csrB 0.261 124
msrA 0.261 125
tamA-tamB-ytfP,tamA 0.261 126
uidR 0.260 127
glnK-amtB 0.260 128
ybjN,ybjN-potF 0.260 129
ampG 0.260 130
rnk-rna,rna 0.259 131
fes-entF-fepE-ybdZ,fes-ybdZ 0.259 132
entD-fepA,fepA 0.259 133
aldA 0.258 134
aidB 0.258 135
naRNA1 0.258 136
naRNA6 0.258 138
naRNA5 0.258 138
naRNA4 0.258 138
naRNA3 0.258 140
naRNA2 0.258 140
pdxK 0.256 142
yfeK-yfeS 0.256 143
aes 0.256 144
alx 0.256 145
ycaK 0.252 146
ycaN 0.252 147
yjgA 0.251 148
pmbA 0.251 149
yecN-cmoA-cmoB 0.251 150
fadE 0.250 151
gmhA,gmhA-yafJ 0.250 151
ompA-sulA,sulA 0.250 153
sxy 0.250 153
thiI 0.250 155
yajO-dxs-ispA-xseB,dxs-ispA-xseB 0.250 156
infB 0.249 157
rpoN-hpf-ptsN-yhbJ-npr,rpoN-hpf-ptsN-yhbJ 0.248 158
mutL-miaA-hfq-hflX-hflK-hflC,mutL-miaA-hfq 0.247 159
dicF 0.246 160
nrdG 0.246 161
ymcF 0.244 162
ymcE-gnsA 0.244 163
cspH 0.244 164
cspG 0.244 164
grpE 0.243 166
nadK-recN,nadK 0.243 166
mdtG 0.242 168
caiF 0.241 169
ygfM-xdhD 0.240 170
seqA-pgm-ybfP,seqA-pgm 0.240 171
ybfF,fldA-ybfE-ybfF 0.240 172
ycbL 0.238 173
yhjX 0.237 174
polA-spf,polA 0.236 175
ydhB 0.236 176
ydhC 0.236 176
yeiP,yeiP-yeiQ 0.235 178
yeiW 0.235 179
pepN 0.234 180
pncB 0.234 181
ynfA 0.232 182
yhhN,yhhN-zntA 0.232 183
ydjM 0.231 184
ypfJ-purC,purC 0.230 185
nc8 0.230 186
yhhS 0.230 187
tdk 0.229 188
yadE 0.227 189
yadI 0.227 190
ybbN 0.227 191
hyaD-hyaE 0.226 192
yfiP,yfiP-pka 0.226 193
yfiF 0.226 194
ldtA-cobT-cobS-cobU,cobT-cobS-cobU,cobS-cobU 0.225 195
yiaB 0.225 196
yiaA 0.225 197
yeaE 0.225 198
ysaE 0.224 200
insJ 0.224 200
insJK 0.224 200
hokA 0.224 202
gcd 0.223 203
hpt,hpt-yadG-yadH,hpt-yadG-yadH-yadI 0.223 204
thrB-thrC,thrB 0.222 205
rpoS-nlpD-pcm 0.222 206
cstA,cstA-ybdD 0.222 207
yjfN 0.221 208
leuV-leuP-leuQ 0.220 209
proL 0.219 210
gloA-rnt,gloA 0.219 211
yfjX-yfjY-yfjZ-ypjF-ypjJ 0.218 212
fabA 0.217 213
araD-araA-araB,araA-araB 0.217 214
araC,araC-yabI 0.217 214
gadX-gadA 0.216 216
flhC-flhD 0.216 217
pdxY 0.215 218
yjeM,yjeM-yjeN-yjeO 0.215 219
ybjE 0.214 220
ahpF 0.211 221
ycjZ 0.211 222
ppiD-ybaV-fadM,ppiD 0.210 223
yceM 0.209 224
yrdB-aroE-tsaC-yrdD 0.208 225
yqgD 0.207 226
yqjC-yqjD-yqjE-yqjK 0.206 227
yjcB 0.205 228
yjcC 0.205 229
tpiA 0.204 230
rclC-rclB-rclA 0.202 231
ykgD 0.202 231
yraP 0.202 233
ygeP 0.201 234
yhcC 0.201 235
yjfZ 0.201 236
ytfA 0.201 236
yccT 0.201 238
yccU 0.201 239
ghrB 0.200 240
yegW-yegX-thiD-thiM,thiD-thiM 0.200 241
spf 0.200 242
frmB-frmA-frmR 0.199 243
ruvC-yebC-nudB 0.198 244
msyB-mdtG-lpxL,lpxL 0.197 245
ydfH 0.196 246
ligA-ypeB 0.195 247
rhtA 0.193 248
ompX 0.193 249
ompX-yliM 0.193 250
rlmJ-gor,rlmJ-gor-agrA,rlmJ 0.192 251
rsmJ-prlC,prlC 0.192 252
ansP 0.191 253
yncG 0.191 253
uhpT 0.191 255
ybaZ 0.191 256
ybaA 0.191 256
yfdV 0.191 258
argG 0.190 259
hinT-ycfL-lpoB-thiK-nagZ,hinT-ycfL-lpoB-thiK-nagZ-ycfP 0.190 260
fhuE 0.190 261
nemA 0.190 262
dusB-fis 0.190 263
rpmE 0.189 264
nuoG 0.189 265
glcA-glcB-glcG-glcD-glcF-glcE 0.188 266
glcC 0.188 266
ogt-abgT-abgB-abgA 0.188 268
abgR 0.188 269
quuQ-ydfU 0.188 270
frr-dxr,frr-dxr-ispU-cdsA,frr-dxr-ispU,frr 0.188 271
lolA-rarA 0.187 272
hns 0.187 273
ycjG 0.186 274
lacI 0.185 275
dhaR 0.185 276
rhsC-ybfB 0.184 277
ybcH-nfrA,nfrA 0.184 278
melR 0.184 279
melA-melB 0.184 279
yeaC 0.184 281
cysG 0.184 282
iscA-iscU-iscS 0.184 283
dkgA 0.183 284
lpxM 0.183 285
argH 0.182 286
baeS-baeR 0.182 287
gltK-gltJ-gltI-insH-3,gltJ-gltI-insH-3,insH-3 0.181 288
sdiA-yecC-yecS-dcyD-fliY,yecC-yecS-dcyD-fliY,fliY 0.181 289
ascG,hydN-ascG 0.181 290
ascF-ascB 0.181 290
rsmG 0.181 292
yjhD 0.181 294
yjhE 0.181 294
insO 0.181 294
yihF 0.180 296
yciV-yciO,yciV-yciO-yciQ 0.179 297
trpA-trpB-trpC-trpD-trpE-trpL,trpD-trpE-trpL,trpL 0.179 298
yfcC 0.179 299
hycI-hycH-hycG-hycF-hycE-hycD-hycC-hycB-hycA 0.179 300
yceI 0.178 301
yfdK-yfdL-yfdM-yfdN-oweS 0.177 302
yfdP-yfdQ 0.177 302
ispF-ispD 0.176 304
rsmE-gshB-yqgE-yqgF,rsmE-gshB 0.175 305
mreD-mreC 0.175 306
rydB 0.175 307
flxA 0.174 308
rem-hokD-relE-relB,hokD-relE-relB,relE-relB 0.174 309
modA-modB-modC,modA 0.174 310
alr 0.172 311
fumB-dcuB 0.171 312
yebS-yebT 0.171 313
prc-proQ 0.171 314
ydfA-ydfB-ydfC 0.171 315
intK-ydfX-dicC 0.171 316
dicA 0.171 317
yjdP 0.170 318
rpoH-ftsX-ftsE 0.170 319
fldB 0.170 320
recJ-dsbC-xerD,xerD,dsbC-xerD 0.170 321
rseP 0.168 322
yagE-yagF 0.167 323
yagB-yagA 0.167 324
lpd 0.167 325
treR 0.167 326
yoeF 0.167 327
gtrA-gtrB-gtrS 0.166 328
pflA 0.166 329
pykF 0.165 330
dapB 0.165 331
nc9 0.165 332
hofQ 0.164 333
yfcD-yfcE,yfcE 0.164 334
nnr-tsaE-amiB-mutL-miaA-hfq-hflX-hflK-hflC,nnr-tsaE-amiB 0.163 335
queG 0.163 336
tusE 0.163 337
yohF 0.162 338
yjbF-yjbG-yjbH 0.161 339
yhiL 0.159 340
yhiM 0.159 340
ilvY 0.158 342
katG,katG-yijE 0.158 343
pfkB-ydiZ-yniA,pfkB 0.158 344
ydiY 0.158 345
yehI 0.158 346
uxaB 0.158 347
ygbF 0.157 348
pqiC 0.157 349
hybG-hybF-hybE-hybD 0.157 350
rdlD 0.157 351
guaA-guaB 0.156 352
apaH-apaG-rsmA 0.155 353
ycgX 0.153 354
ygdG 0.153 355
ypfH-tmcA 0.152 356
ycgB 0.152 357
dadA-dadX 0.152 357
yihR 0.152 359
glnQ 0.151 360
yjcS 0.151 361
treA 0.151 362
paaA-paaB-paaC-paaD-paaE-paaF-paaG-paaH-paaI-paaJ-paaK 0.150 363
paaZ 0.150 364
hyuA 0.150 365
bluF 0.150 367
ycgZ-ymgA-ariR-ymgC,ycgZ 0.150 367
ymgA-ariR 0.150 367
flgN-flgM-flgA 0.149 369
flgB-flgC-flgD-flgE-flgF,flgB-flgC-flgD-flgE-flgF-flgG-flgH-flgI-flgJ 0.149 370
yaaW 0.149 371
ynfK 0.149 372
yhhM 0.148 373
aphA-yjbQ-yjbR,aphA 0.147 374
fur 0.147 375
fur-uof 0.147 375
narV-narW-narY-narZ 0.147 377
insH21 0.147 379
insH-4,insH-4-ynaJ 0.147 379
insH-9 0.147 379
ykgL 0.147 381
yqfE 0.146 382
argP 0.146 382
pgl 0.145 384
nfi-yjaG-hupA 0.144 385
yggN-yggL-trmI,yggL-trmI 0.144 386
mutY-yggX-mltC,mutY-yggX-mltC-nupG,mutY-yggX 0.144 387
wcaB-wcaA-wzc-wzb-wza 0.144 388
ytiB 0.144 389
srmB 0.143 390
trmN 0.143 391
ilvE-ilvD,ilvE-ilvD-ilvA 0.143 392
thyA 0.143 393
yjgM 0.143 394
yjgN 0.143 395
eptC 0.142 396
rutG-rutF-rutE-rutD-rutC-rutB-rutA 0.142 397
rutR 0.142 397
baeR-yegP 0.141 399
ahpC,ahpC-ahpF 0.141 400
yjbT 0.141 401
psiE 0.141 401
sibE 0.140 403
yedV-yedW,yedW 0.139 404
hiuH,hiuH-yedY-yedZ,hiuH-yedY-yedZ-zinT 0.139 404
yedY-yedZ 0.139 406
clcB 0.139 407
yegX 0.139 408
ygdR 0.139 409
tas 0.139 410
nupX 0.138 411
yhaJ 0.137 412
yhaK-yhaL 0.137 413
cdsA 0.137 414
syd 0.136 415
queF,queF-ygdH 0.136 416
fepC-fepG-fepD,fepG-fepD 0.136 417
yhdT-panF-prmA-dusB,yhdT-panF-prmA 0.136 418
typA5p 0.136 419
yiiX 0.136 420
entH 0.135 421
inaA 0.134 422
yfaH 0.134 423
serC-aroA-ycaL,serC,serC-aroA 0.134 424
yegQ,yegQ-cyaR 0.133 425
yjiP 0.133 426
yeaX 0.133 427
insH-1 0.132 428
yejK 0.132 429
ybjS 0.131 430
nudK 0.131 431
yjhU 0.130 432
ycaR-kdsB,ycaR-kdsB-ycbJ 0.130 433
obgE-yhbE-rpmA-rplU,rpmA-rplU 0.129 434
ispB 0.129 435
purD-purH 0.129 436
yijF 0.129 437
yhbW 0.129 438
yggN 0.128 439
hrpB 0.128 440
mepM-znuA,znuA 0.128 441
yidF 0.127 442
fryA-ypdE-ypdF-fryC-fryB 0.127 443
nfrA-nfrB,nfrB 0.126 444
vsr-dcm 0.126 445
yfcJ 0.125 446
ycfZ-ymfA 0.125 447
hspQ 0.125 448
fepB 0.125 449
araG-araF-araH 0.124 450
yeaY-tsaB-yoaA,yoaA 0.124 451
pgk,fbaA-pgk,mscS-fbaA-pgk 0.123 452
mazF-mazE-relA-rlmD,mazE-relA-rlmD,rlmD 0.122 453
barA 0.122 454
ydhL 0.122 455
rraA 0.122 456
dosP-dosC,dosC 0.122 457
yddY 0.122 458
mfd 0.122 459
recA-pncC-mltB,mltB 0.121 460
srlA-srlE-srlB-srlD-gutM-srlR-srlQ,srlA-srlE-srlB-srlD-gutM-srlR 0.121 460
ygdQ-ygdR,ygdQ 0.121 462
lrp 0.121 463
trxB 0.121 464
rnb-yciW,yciW 0.121 465
xseA 0.120 466
gapC 0.120 467
cybB,cybB-ydcA-sokB 0.120 467
yjfP 0.119 469
bsmA 0.119 470
sodC 0.119 471
gstA 0.119 472
yneL 0.119 473
dtd-yiiD 0.118 474
rraA-menA,menA 0.118 475
yfhG 0.118 476
rpmJ-secY-rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplO-rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rpmD-rpsE-rplR-rplF-rpsH-rpsN-rplE-rplX-rplN,rplR-rplF-rpsH-rpsN-rplE-rplX-rplN 0.118 477
fecE 0.117 478
ldtA 0.117 479
phoA-psiF 0.117 480
iraP-phoA,iraP 0.117 481
yffQ-yffR 0.117 482
yniA 0.117 483
ssb 0.117 484
uvrA 0.117 485
yncJ 0.117 486
ydcQ-hicA 0.117 487
acpS-pdxJ 0.116 488
ves 0.116 489
accB-accC,accB-accC-yhdT 0.116 490
hslO 0.116 491
hslR-hslO 0.116 492
pspG 0.115 493
ampC 0.115 494
sdhC-sdhD-sdhA-sdhB,sdhC-sdhD-sdhA-sdhB-sucA-sucB-sucC-sucD-sdhX 0.115 495
ybgU 0.115 496
ybgV 0.115 497
yceJ-yceO-solA,yceO-solA,solA 0.114 498
dapE-ypfN 0.114 499
puuD-puuR,puuD-puuR-puuC-puuB-puuE 0.114 500
puuP-puuA,puuP-puuA-ymjE,puuA 0.114 501
yceH 0.114 502
mdtH 0.114 503
rimJ-yceH-yceM,rimJ-yceH-yceM-murJ,rimJ 0.114 503
rbsB-rbsK-rbsR 0.114 505
ryeG 0.114 506
yodE 0.114 507
citT 0.113 508
yoaI 0.113 509
yeaL 0.113 510
btuD-btuE-btuC,btuE-btuC 0.113 511
btuC-ihfA,ihfA 0.113 512
paaJ 0.113 513
alaX-alaW 0.112 514
yfeC-yfeD 0.112 514
xisD 0.112 516
intD 0.112 517
deoC-deoA,deoC-deoA-deoB,deoC-deoA-deoB-deoD 0.112 518
yjjW-yjjI,yjjI 0.112 519
cspA-insJ-insK,cspA 0.112 520
yjeT 0.111 521
moeB-moeA 0.111 522
iaaA-gsiA,iaaA-gsiA-gsiB-gsiC-gsiD 0.111 523
yhjD 0.111 524
parC,plsC-parC 0.111 525
yhfS-yhfT-yhfU-php-yhfW-yhfX 0.111 526
prc-proQ-msrC,msrC 0.110 527
kdsC-lptC,kdsC-lptC-lptA-lptB 0.109 528
cdaR 0.109 529
phoU-pstB-pstA-pstC-pstS,pstB-pstA-pstC-pstS,pstA-pstC-pstS,pstS 0.108 530
sbmC,yeeX-yeeA-sbmC,yeeA-sbmC 0.108 531
esrE 0.108 532
pdxA-surA-lptD,surA-lptD,lptD 0.107 533
djlA,djlA-yabP-yabQ 0.107 534
yfbK 0.107 535
ribE-nusB-thiL,ribE-nusB-thiL-pgpA 0.107 536
ygbF-ygbT-casE-casD-casC-casB-casA 0.106 537
pheP 0.106 538
cysZ,cysZ-cysK 0.106 539
yjbJ 0.106 540
malZ 0.105 541
cysE-gpsA-secB-grxC-yibN,gpsA-secB-grxC-yibN,yibN 0.105 542
rraA-menA-hslU-hslV,hslU-hslV 0.105 543
yhhZ-insA-6-insB-6-insAB6 0.104 544
cho 0.104 545
spy3p 0.104 546
sdiA-yecC-yecS-dcyD,yecC-yecS-dcyD 0.104 547
dtpD 0.103 548
ybgI-ybgJ-ybgK-ybgL,ybgI-ybgJ-ybgK-ybgL-nei 0.103 548
yqjA-mzrA,yqjA-mzrA-yqjC-yqjD 0.103 550
yqiM 0.103 551
mukF-mukE 0.103 552
dnaK-dnaJ-insL-1,dnaK-dnaJ,dnaK 0.102 553
yaaI 0.102 554
yfdR-yfdS-yfdT 0.102 555
lptE 0.102 556
yldA 0.102 557
yidE 0.102 558
tdcF-tdcE-tdcD-tdcC-tdcB-tdcA-tdcG 0.102 559
tdcR 0.102 560
ubiX 0.101 561
ytfH 0.101 562
yafZ 0.101 563
malT 0.101 564
sroA 0.101 565
thiQ-thiP-thiB 0.101 566